Gene Pmen_4483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4483 
Symbol 
ID5107178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4916019 
End bp4916477 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content67% 
IMG OID640505754 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001189962 
Protein GI146309497 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACCC TGAATCTCAA CGGCCAGGAC CATGAACTGG ACGTGGCGGG CGATATGCCG 
CTGCTCTGGG CCCTGCGTGA CGTGGCCAAC CTCACCGGCA CCAAGTACGG CTGTGGCATG
GCGCTATGCG GCGCCTGCAC GGTGAACGTC GACGGCCAGC CGACCCGCTC CTGCGTGACC
CCGGTATCGG CGCTGGTGGG CAAGCGCATC ACCACCATCG AGGCGGTCGG CGAAGACGCC
GTGGGCAAGG TGGTCCAGGA GGCCTGGCGC CAGCTCGACG TGGTGCAATG CGGCTACTGC
CAGTCCGGGC AGATCATGGC CGCCACGGCG CTGCTCAGCG GCAACAAGGC ACCGAGCGAC
GCCGATATCG ACGCGGCCAT GAGCGGCAAC ATCTGCCGCT GCGCCACCTA TGTGCGGATT
CGTGCCGCCA TTCACGACGC TGCCGGCAAG CTGGCCTGA
 
Protein sequence
MITLNLNGQD HELDVAGDMP LLWALRDVAN LTGTKYGCGM ALCGACTVNV DGQPTRSCVT 
PVSALVGKRI TTIEAVGEDA VGKVVQEAWR QLDVVQCGYC QSGQIMAATA LLSGNKAPSD
ADIDAAMSGN ICRCATYVRI RAAIHDAAGK LA