| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4451 |
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| Symbol | |
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| ID | 5107146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4880921 |
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| End bp | 4882516 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640505722 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001189930 |
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| Protein GI | 146309465 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCA ATCTGCCGAT CAGCGGCCGG CAGGTCAGCC TGCCGCCCCA CTGCAACATC
CTCTCCACCA CCGACCTCAA GGGTACGCTG ACCTACGTCA ACCCGGATTT CGTCGCCATC
AGCGGCTTCA GCGAAGACGA GCTTATCGGC CGCAACCACA ACCTGGTGCG CCACCCGGAC
ATGCCGCCGG CCGCCTTCGC CCACCTGTGG CAGAGCCTGA AAGCCGGGCG CTCGTGGATG
GGGCTGGTGA AGAACCGCTG CAAGAACGGC GATCACTACT GGGTCAGCGC CTACGTCACG
CCCATGCGCA GGGACGGGCG CATCGTCGAA TACCAGTCGG TGCGCACGGC CGCCAGCGAC
GCGCAGATCG CCGCGGCCGA GGCGTTGTAT GCCGAACTGC GCGCCGGCCG CACGCCGCGC
GTGCTGCGCC CGCCCCGCCT GAGCCTGGGC GCGCGTCTGG CCCTGATCAG CGGTCTGCTG
CCAGCCTTCG CCGCGCTGAC GCTGAGCCTG GCCGGCGATC TGCCCGCACT GCCGCTGGTC
ACCGCTGCCA GCGCCCTGGG CCTGACCCTG GGTCTGATCG TGCACCAGGC ACTGCGACCG
CTCGAGCGGC TGGCGACACA GGCGCGTCGG CACGCTGACA ACCCGCTCAG CCAATGGCTG
TACAGCGGCC GCAACGATGC CTTCGGCGCC ATCGCCTTCG CCCTGCACAG CCTGCAGGCC
GAAGCCGGTG CGGTGGTCGG GCGCATCGCC GACTCGGCGC GCCAGCTCAG CGGCGAGGCC
GCGCAGCTGG CCAGTGCGGT GGACCATCAC AACAGCGCCA CCCTGCAGCA ACGCGCGCAG
ACCGAGCAGG TCGCCAGCGC CATGGGACAG ATGACGGTGA GCGTGCAGGA GGTGGCGCAC
AACGCCCAGC TCAGCGCCAG CGCGGCCAGC GAGGCGGATC AGGAAAGCCA GGAAGGGCGG
CAGCTGGTGG ACGCCACCTG CCAAGGCATC GCCGAGCTGG CCGACGGCCT GCGCGCCAGC
CATGACCAGG TCGAGCAGCT GGCGGCGCGC AGCCATGAGA TCGGCCAGGT GCTAACGGTG
ATCGGCGATA TCGCCGGGCG CACCAATCTG CTCGCGCTCA ACGCCGCCAT CGAGGCTGCC
CGCGCCGGCG AGGCCGGCCG CGGCTTTGCC GTGGTGGCCG AGGAAGTACG CGCGCTGGCG
CAGCGCACGC AGGATTCCAC CCAGCAGATC GAGCGCATCA TCGGCAGCCT GCAGGCGAGC
GTCGAGCAGG CGGTCGCCTG CATGGCCGGC AGCCGGCAAC AGGCGCAGGC CATCGCCGCC
GAGGCCCGGC AGGCGGCGCA GGCGCTGCAT GGCATCACCC AGCGGGTGGG CCGGATCAGC
GACATGAACA TCCAGATCGC CAGTGCGGTC GAACAGCAAA GCGCGGTTGG CGACGACATC
CAGCGCAACC TGCAGGGGAT TCGCCAGGCT TGCACAGGCA CCACCGAGGC CAGCGCGCGC
AGCCACCACA GCGCCGGGCA ACTGGCCAAT CTGGCCGAGC GCCTGCAGTT GCTGGTCGAA
CAGTTCTGGA GTCAGCGCCA GGGCCGCCCG GGATGA
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| Protein sequence | MKLNLPISGR QVSLPPHCNI LSTTDLKGTL TYVNPDFVAI SGFSEDELIG RNHNLVRHPD
MPPAAFAHLW QSLKAGRSWM GLVKNRCKNG DHYWVSAYVT PMRRDGRIVE YQSVRTAASD
AQIAAAEALY AELRAGRTPR VLRPPRLSLG ARLALISGLL PAFAALTLSL AGDLPALPLV
TAASALGLTL GLIVHQALRP LERLATQARR HADNPLSQWL YSGRNDAFGA IAFALHSLQA
EAGAVVGRIA DSARQLSGEA AQLASAVDHH NSATLQQRAQ TEQVASAMGQ MTVSVQEVAH
NAQLSASAAS EADQESQEGR QLVDATCQGI AELADGLRAS HDQVEQLAAR SHEIGQVLTV
IGDIAGRTNL LALNAAIEAA RAGEAGRGFA VVAEEVRALA QRTQDSTQQI ERIIGSLQAS
VEQAVACMAG SRQQAQAIAA EARQAAQALH GITQRVGRIS DMNIQIASAV EQQSAVGDDI
QRNLQGIRQA CTGTTEASAR SHHSAGQLAN LAERLQLLVE QFWSQRQGRP G
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