Gene Pmen_4432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4432 
Symbol 
ID5107127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4860184 
End bp4860498 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content62% 
IMG OID640505703 
ProductNAD/NADP transhydrogenase alpha subunit-like protein 
Protein accessionYP_001189911 
Protein GI146309446 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.447253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGA TTTCCGACGG CATCTACAAC CTGATCATCT TCGTGCTGGC CATCTATGTC 
GGCTACCACG TGGTGTGGAA TGTCACCCCG GCCCTGCACA CCCCGCTGAT GGCCGTGACT
AACGCCATCT CGGCGATCGT GATCGTCGGC GCCATGCTGG CCGCTGCCCT CACCGTCACC
CCGCTGGGCA AGACCATGGG CACCCTGGCC GTGGCCCTGG CCGCGGTCAA CGTGTTCGGT
GGTTTCCTGG TCACCCGGCG CATGCTGGAA ATGTTCAAGA AAAAGGCGCC GAAAGCGCAG
GCGGAGAAAC ACTGA
 
Protein sequence
MDLISDGIYN LIIFVLAIYV GYHVVWNVTP ALHTPLMAVT NAISAIVIVG AMLAAALTVT 
PLGKTMGTLA VALAAVNVFG GFLVTRRMLE MFKKKAPKAQ AEKH