Gene Pmen_4400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4400 
Symbol 
ID5107253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4824022 
End bp4824417 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content61% 
IMG OID640505666 
Producthypothetical protein 
Protein accessionYP_001189879 
Protein GI146309414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.188798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCC GTTTTCTTCT GTGGATGCTT GGCCGTCTGA TGGCCAAGGC CAGCCGTGAC 
AATCCAGACT TCCGCCAGCA GCTCGAAGGC CGCGACATGG TCTTTCAGCT GCACACCCTC
GACGGCAAGG TGGCGCGCCA CTTCATCGTT GCCGGCCAGC GTGTGACCAG CAAGCGCGGC
GCGGCCAAGG AGCCTGCCTT CGCCATCGGC TTCAGGGATG CCGCCTACGG CTTCGAGACC
ATGACCGCCA AGAACAAGCA GCTGGCCTTC ATGCAGGGTA TCCAGAACAA GGACATCCAG
ATTCAGGGCA ACCCGGCGCT GGTCATGTGG TTCCAGGGTC TGACCAAGTA CCTGATGCCG
AAGAAGAAGG GCGACGCGCC GAAGAAGGCC GCCTGA
 
Protein sequence
MKFRFLLWML GRLMAKASRD NPDFRQQLEG RDMVFQLHTL DGKVARHFIV AGQRVTSKRG 
AAKEPAFAIG FRDAAYGFET MTAKNKQLAF MQGIQNKDIQ IQGNPALVMW FQGLTKYLMP
KKKGDAPKKA A