Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4334 |
Symbol | |
ID | 5107187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4750374 |
End bp | 4751603 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640505600 |
Product | acyl-CoA dehydrogenase type 2 |
Protein accession | YP_001189813 |
Protein GI | 146309348 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCG AGGCCCGTCT GCACCCCAGC CTGCGTGACG AACCGCTGCT GGCCGCGCAC CTGTTCCCGG TGGATTTCGG CAACCGCACG GCCAAGGTCG AACGCCTGGT CCGGCGTCTG GCGGCCAGCG CGGTGGAGCG TGATCGCGCC GGCGGCAGCC CGCAGGCCGA GCGCGAGCTG CTGCGCGACA GCGGCCTGCT GACCCTGGCC GTGCCGCAGC AATACGGCGG CCAGGGCGTG GCCTGGCCGG AGATCTACCG CATCGTGCGC TACCTGGCGG CGGTGGACAG CTCGCTGGCC CACCTGTTCG CCTTCCAACA CCTGCAGGTG GCGACCATCG TGCTGTTCGG CAACCCCGAT CAGCAGCGCC ACTGGTTGAC GCGTACGGTG CAGGAGCGCT GGTTCTGGGG CAACGCCACC AACGGCCGCG ACACCGGCCT CGTGCTCAGC CCGCGCGAGG AGCATTACGA GCTCAATGGC AGCAAGTCGT TCTGCTCCGG CGCGCTCGGC GCCGATGCGC TGGTGATCAG CGCACCGCGC GGCAGGAACC CGGAGGATCG GGTGTTCATC GTGCTGCCCA GCCAGCGTGA GGGCCTGGCG GTGAACAGCG ACTGGGACGG CTTCGGCCAG CGCCAGACCG ACAGCGGCAC GGTGCAGTTC GAGCAGGTGT TCGTCGACGC CAGCGAGCTG CTCGGCCCGG CCGGCCCCAG CCCGCGTACC ACCCTGCGCG CCTGCCTGTC GCAGCTGATC CTCACCCAGC TCTACCTGGG CAATGCCCAG GGCGCCCTGG ACGCGGCGCT GCGCTACACC CGCGAGCAGA GTCGCGCCTG GCCGGCATCA GGCGTGGCCA ATGCCAGTGA CGATCCCTTC ATCCAGCAAC GCTACGGCGA ACTGTGGCTG CGCTACCGCA GCGCCCTGCC CCTGGCCGAG CACGCCGCCC AGCGCCTGCA GAGCGCCTGG GAAAAGCCGG CGCTGACCGC CGCCGAACGC GCCGAGGTGG CGCTGGCCAT CAGCGAGGCC AAGGTGGTGG CGGCACGCGC CGCGCTGGAG ATCACCAGCC AGATCTTCGA AGCCATGGGC GCCCGTGCCA CCAGCTCGCG TTACGGCTTC GACCGCTTCT GGCGCAACGT GCGGGTGCAC AGCCTGCATG ACCCCATCGA CTACAAGGTG CGCGACCTCG GTCACTGGCT GCTCAGCGGC CAGGGGCCGC AGCCGTCGCT GTACGGCTGA
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Protein sequence | MSAEARLHPS LRDEPLLAAH LFPVDFGNRT AKVERLVRRL AASAVERDRA GGSPQAEREL LRDSGLLTLA VPQQYGGQGV AWPEIYRIVR YLAAVDSSLA HLFAFQHLQV ATIVLFGNPD QQRHWLTRTV QERWFWGNAT NGRDTGLVLS PREEHYELNG SKSFCSGALG ADALVISAPR GRNPEDRVFI VLPSQREGLA VNSDWDGFGQ RQTDSGTVQF EQVFVDASEL LGPAGPSPRT TLRACLSQLI LTQLYLGNAQ GALDAALRYT REQSRAWPAS GVANASDDPF IQQRYGELWL RYRSALPLAE HAAQRLQSAW EKPALTAAER AEVALAISEA KVVAARAALE ITSQIFEAMG ARATSSRYGF DRFWRNVRVH SLHDPIDYKV RDLGHWLLSG QGPQPSLYG
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