Gene Pmen_4254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4254 
Symbol 
ID5107028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4658270 
End bp4658524 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content62% 
IMG OID640505518 
Producthypothetical protein 
Protein accessionYP_001189733 
Protein GI146309268 
COG category[S] Function unknown 
COG ID[COG5460] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0000233068 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCGCA GCAAGGCTCC CAGTCTGGCG CTCGAGCCTG CCCAGGAGCA GGCCGCGCTG 
CTAATGCTGC AGCGCTTTCT CGATGAGCGT TTCGAGCTGC AACTGGGCAC CTTCGAAGTG
CAGGAAATCC TCGACCAGAT CACCCGCGAG CTGGCGCCGC ACTACTACAA CAAGGCGATT
CTCGACGTGC AGGCGCACCT GAAGGACAGG TTCGAAAGCA TCGAGAGCGA CCTCTGGGCG
CTCGAAAAGA GCTGA
 
Protein sequence
MARSKAPSLA LEPAQEQAAL LMLQRFLDER FELQLGTFEV QEILDQITRE LAPHYYNKAI 
LDVQAHLKDR FESIESDLWA LEKS