Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4237 |
Symbol | |
ID | 5106661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4641640 |
End bp | 4642581 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640505501 |
Product | lysophospholipase-like protein |
Protein accession | YP_001189716 |
Protein GI | 146309251 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAGC CCTTTCAGCC CGAGCAACTG CGCCCTCTGC TGCGACCCTT GGCCGCAGCG CGCCTCGATT TGCCGGCGCT GCAGGCCTAT CGCAGTTTCT ACGGGCTCGA TCTGAGCGCG CGCCATGTCG GGCTGGACAA CCGCCTCGGC AGCTTCAACG CCGCCGGCTA TCAGATTGCC GTACAGCTCT GGGCGCCGGC CGAACCGTGC GGCACTCTGC TGTTGCTGCA CGGCTACTAC GACCATATGG GGCTGTACCG CCACGTGGTC GACTGGGCGC TGGCCATGAA CTTCGCCGTG CTCGCCTGCG ATCTGCCGGG CCATGGGCTT TCCAGCGGCG CGCGCGCGAG CATCGGCGAC TTCGCCGAGT ACCAGCAGGT GCTGGCCGGA TTGTTCGAAC AGGCTGCCGA GCTGGGGTTG CCGCAACCCT GGCACCTCTG CGGGCAGAGC ACCGGTGGGG CGATTCTGCT GGACTACCTG CTGACCGGCG CCCAGCGTCC CGAGCTGGGC CAGAGCATCC TTCTGGCGCC ACTGGTGCGG CCGCGTGCCT GGGCCTGGTC GAAGCTCAGC TACCGCCTGC TCAGCCCCTT CGTGCGCGAG ATTCCCCGGC GTTTCAGCGA GAACTCCAGC GACGCCACCT TCATCGATTT CGTTCACAAT CTCGACCCGC TGCAGCCGCG CAGCCTGCCC ACCGCCTGGG TCGGCGCGCT GGCCCAGTGG GTGCCGCGCA TCGAGGCGGC GGCGCGCAGC GAGCACAGCC CGCTGATCAT TCAGGGCGAG GCGGACATGA CGGTGGACTG GCGTTACAAC CTCGAGGTGC TGCAGGACAA GTTCCGCCAG CCGGAGATTC TGCGGCTGAC GGAGGCCCGG CATCATCTGG CCAACGAGAA CGAAGCGTTG CGCCAGCGCT ACTTCGACTT TTTGCGCGAG CGGCTGGCGT AG
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Protein sequence | MSEPFQPEQL RPLLRPLAAA RLDLPALQAY RSFYGLDLSA RHVGLDNRLG SFNAAGYQIA VQLWAPAEPC GTLLLLHGYY DHMGLYRHVV DWALAMNFAV LACDLPGHGL SSGARASIGD FAEYQQVLAG LFEQAAELGL PQPWHLCGQS TGGAILLDYL LTGAQRPELG QSILLAPLVR PRAWAWSKLS YRLLSPFVRE IPRRFSENSS DATFIDFVHN LDPLQPRSLP TAWVGALAQW VPRIEAAARS EHSPLIIQGE ADMTVDWRYN LEVLQDKFRQ PEILRLTEAR HHLANENEAL RQRYFDFLRE RLA
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