| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4219 |
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| Symbol | |
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| ID | 5106643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4624473 |
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| End bp | 4625126 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505483 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001189698 |
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| Protein GI | 146309233 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGCTTGG CCCTTTTCGA TCTCGACAAC ACCCTGCTGG CTGGCGACAG CGATCACAGC
TGGGGCGAAT TCGTCTGCCA GCGCGGCCTG GTCGACGCGG CCGAGTACCT GGCGCGCAAC
GACGCCTTTT ATGCCGACTA CTGTGCCGGC AAGCTGGACG TGGTGGCCTA CCAGAACTTC
AGCCAGGCCA TTCTGGGTCG CAGTGAAATG GCGCAACTGG CGCAGTGGCA CCGCGAGTTC
ATGGCCGAGG TGATCGAGCC GATCATCCTG GCCAAGGGTG AGGCGCTGCT GGCCGAACAC
CGTGAGGCCG GTGACAAGCT GGTGATCATC ACCGCCACCA ACCGCTTCGT CACCGCCCCG
ATTGCCGAAC GCCTGGGCGT GGAGACGCTG ATCGCCACCG AATGCGGCAT GCAGGACGGT
CGCTATACCG GGCAGATCAC CGGCACGCCG TGCTACCAGG GCGGCAAGGT GACGCGCCTG
AACGAATGGC TGGCCGAGAC GGGGTACAAC CTGGACGGCG CCTACTTCTA TAGCGACTCG
CGCAATGACC TGCCGCTGCT CGAGGCCGTG GCCAACCCGG TAGCGGTCGA CCCGGACGAG
GTACTGCGCG CCACCGCCCT CGAACGCGGC TGGCCGGTGA TTTCGCTGCG CTGA
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| Protein sequence | MRLALFDLDN TLLAGDSDHS WGEFVCQRGL VDAAEYLARN DAFYADYCAG KLDVVAYQNF
SQAILGRSEM AQLAQWHREF MAEVIEPIIL AKGEALLAEH REAGDKLVII TATNRFVTAP
IAERLGVETL IATECGMQDG RYTGQITGTP CYQGGKVTRL NEWLAETGYN LDGAYFYSDS
RNDLPLLEAV ANPVAVDPDE VLRATALERG WPVISLR
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