| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4158 |
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| Symbol | |
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| ID | 5105677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4560991 |
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| End bp | 4561587 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505422 |
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| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
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| Protein accession | YP_001189637 |
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| Protein GI | 146309172 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACT TCAAGGAACT GGTGCTGGCC AGCCATAACG CCGGCAAGCT CAAGGAACTG
CAGGCCATGC TCGGCGACGC CGTGCGCGTG CGTTCGATCG GCGAATTCTC CAGCGTCGAG
CCGGAGGAAA CCGGCCTGTC GTTCGTCGAA AACGCCATCC TCAAGGCGCG CAATGCCGCA
CGCATCTCCG GGCTGCCGGC GCTGGCCGAC GACTCCGGCC TGGCGGTGGA CGCCCTCGGC
GGCGCACCCG GCATCTACTC GGCGCGCTAC GCCGATGGTC AGGGCGATGC GGCGAACAAC
GCCAAGCTGC TCGCGGCCCT GAAAGACGTA CCGGATACCG AGCGCGGCGC GCAGTTCGTC
TGCGCCCTGG CGCTGGTGCG CCACGCCGAC GATCCGCTGC CGATCCTCTG CGAAGGTCTG
TGGCACGGCA GCATCCTGCA CGAGGCCCGT GGCGAGCACG GCTTCGGCTA CGACCCGCTG
TTCTGGGTGC CGGAAACCGG CTGCTCCAGC GCCGAACTGC CGGCCGAGCA GAAGAACCGC
CTGAGCCACC GCGCCCGCGC CATGGCGCTG CTCAAACAGC GCCTGGGGCT GGCATGA
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| Protein sequence | MTDFKELVLA SHNAGKLKEL QAMLGDAVRV RSIGEFSSVE PEETGLSFVE NAILKARNAA
RISGLPALAD DSGLAVDALG GAPGIYSARY ADGQGDAANN AKLLAALKDV PDTERGAQFV
CALALVRHAD DPLPILCEGL WHGSILHEAR GEHGFGYDPL FWVPETGCSS AELPAEQKNR
LSHRARAMAL LKQRLGLA
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