Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4096 |
Symbol | |
ID | 5105615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4485243 |
End bp | 4487420 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640505360 |
Product | malate synthase G |
Protein accession | YP_001189575 |
Protein GI | 146309110 |
COG category | [C] Energy production and conversion |
COG ID | [COG2225] Malate synthase |
TIGRFAM ID | [TIGR01345] malate synthase G |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAC GCGTTCAAGT CGGTGGCCTG CAGGTCGCCA AAGCCCTGTA CGACTTCGTG AACAACGAAG CCATTCCCGG TACCGGCATC GCTGCCGACC AGTTCTGGGC CGGTGCCGCT GCGGTCATCA AGGACCTGGC ACCGAAGAAC CGTGCCCTGC TGGCCAAGCG CGACGAGCTG CAGGCACAGA TCGATGCCTG GCACCAGGCG CGCAAGGGTC AGGCCCATGA CGCCGCTGCC TACAAGGCCT TCCTCCAGGA AATCGGCTAC CTGCTGCCGG AGCCGGAAGA CTTCCAGGCC ACCACTGCCA ATGTCGACGA AGAGATCGCC CGCCTGGCCG GCCCGCAGCT GGTGGTGCCG GTGATGAACG CGCGCTTCGC CCTGAACGCT TCCAACGCCC GCTGGGGCTC GCTGTACGAC GCGCTGTACG GCACTGACGT AATCAGCGAA GAAGGCGGCG CCGAGAAGGG CAAGGGCTAC AACAAGGTGC GTGGCGACAA GGTAATCGCC TTCGCCCGCG CCTTCCTCGA CGAGGCCGCG CCGCTGGCGG CCGGCTCGCA CGTCGATGCC ACCGGCTATG CCATCGTCGG CGGCAAGCTG GTCGTCGCCC TCAAGGGCGG CAGCAACAGC GGCCTGCGTG ACGACGCGCA ACTGGTCGGC TTCCAGGGCG AGGCCAGTGC GCCGATCGCC GTGCTGCTCA AGCACAACGG CCTGCACTTC GAGATCCAGA TCGACGCCTC CAGCCCCATC GGCAGCACCG ACGCCGCCGG CGTGAAAGAC GTGCTGATGG AAGCGGCGCT GACCACCATC ATGGACTGCG AAGACTCCGT CGCGGCGGTC GATGCCGATG ACAAGGTAGT GGTTTACAAG AACTGGCTGG GCCTGATGAA GGGCGACCTG GCCGAGGAAG TGTCCAAGGG CGGCCAGACC TTCACCCGCA CCATGAACCC GGACCGCGTC TACACCAAGC CGGACGGCTC CGAGCTGACC CTGCATGGCC GCTCGCTGCT GTTCGTACGC AACGTCGGTC ACCTGATGAC CAACCCGGCC ATTCTCGATG CCGAAGGCAA CGAGATTCCC GAGGGCATCC AGGACGCGCT GTTCACCAGC CTGATCGCGG TGCACAACCT GATCGGCAAT ACCACGCGCA AGAACACCCG CACCGGCAGC GTGTACATCG TCAAGCCGAA GATGCACGGC CCGGAAGAAG TCGCCTTCGC CAGCGAAATC TTCGCCCGCG TCGAGGATGT GCTGGGCCTG GCCCGCAACA CCCTGAAGGT CGGCATCATG GACGAAGAGC GCCGCACCAC CGTCAACCTC AAAGCGTGCA TCAAGGCCGC CAGCGAGCGC GTGGTCTTTA TCAACACCGG CTTCCTCGAC CGTACCGGTG ACGAGATCCA CACCTCCATG GAAGCCGGCG CCGTGGTGCG CAAGGCCGCC ATGAAGAGCG AGACCTGGAT CGGAGCCTAC GAGAACAACA ACGTCGACGT CGGCCTGGCC ACCGGCCTGC AGGGCCGCGC GCAGATCGGC AAGGGCATGT GGGCCATGCC GGACCTGATG GCGGCGATGG TCGAGCAGAA GATCGCTCAC CCGCTGTCCG GCGCCAATAC CGCCTGGGTC CCCTCGCCGA CCGCAGCCAC CCTGCACGCC CTGCACTACC ACAAGGTCGA CGTGTTCGCC CGTCAGGCCG AACTGGCCAA GCGCACCCCG GCTTCGGTGG ACGACATCCT GACCATCCCG CTGGCTAAGG ACACCAACTG GAGCGAGGAG GAAATCCGCA ACGAGCTGGA CAACAACTCG CAAGGTATCC TCGGCTACGT GGTGCGCTGG ATCGACCAGG GCGTCGGCTG CTCCAAGGTG CCGGACATCA ACGACGTCGG CCTGATGGAA GACCGCGCCA CCCTGCGCAT CTCCAGCCAG CTGCTGGCCA ACTGGCTGCG CCACGGCATC GTCAGCGAGG CGCAGGTGGT CGAAAGCCTC AAGCGCATGG CGCCGGTGGT GGATCGTCAG AACGCCAATG ACCCGCTGTA CCGCCCGCTG GCCCCGGACT TCGACAACAA CGTCGCCTTC CAGGCCGCGC TGGAGCTGGT GGTCGAAGGC ACCAAGCAGC CCAACGGCTA CACCGAGCCG GTGCTACACC GCCGTCGTCG CGAGTTCAAG GCCAAGAACG GTCTCTGA
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Protein sequence | MTERVQVGGL QVAKALYDFV NNEAIPGTGI AADQFWAGAA AVIKDLAPKN RALLAKRDEL QAQIDAWHQA RKGQAHDAAA YKAFLQEIGY LLPEPEDFQA TTANVDEEIA RLAGPQLVVP VMNARFALNA SNARWGSLYD ALYGTDVISE EGGAEKGKGY NKVRGDKVIA FARAFLDEAA PLAAGSHVDA TGYAIVGGKL VVALKGGSNS GLRDDAQLVG FQGEASAPIA VLLKHNGLHF EIQIDASSPI GSTDAAGVKD VLMEAALTTI MDCEDSVAAV DADDKVVVYK NWLGLMKGDL AEEVSKGGQT FTRTMNPDRV YTKPDGSELT LHGRSLLFVR NVGHLMTNPA ILDAEGNEIP EGIQDALFTS LIAVHNLIGN TTRKNTRTGS VYIVKPKMHG PEEVAFASEI FARVEDVLGL ARNTLKVGIM DEERRTTVNL KACIKAASER VVFINTGFLD RTGDEIHTSM EAGAVVRKAA MKSETWIGAY ENNNVDVGLA TGLQGRAQIG KGMWAMPDLM AAMVEQKIAH PLSGANTAWV PSPTAATLHA LHYHKVDVFA RQAELAKRTP ASVDDILTIP LAKDTNWSEE EIRNELDNNS QGILGYVVRW IDQGVGCSKV PDINDVGLME DRATLRISSQ LLANWLRHGI VSEAQVVESL KRMAPVVDRQ NANDPLYRPL APDFDNNVAF QAALELVVEG TKQPNGYTEP VLHRRRREFK AKNGL
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