| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4012 |
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| Symbol | pdxA |
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| ID | 5110235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4388935 |
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| End bp | 4389948 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505275 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001189491 |
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| Protein GI | 146309026 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACGC AGCAACGCTT TGCCCTCACC CCTGGCGAGC CAGCCGGCAT AGGCCCGGAT
CTTTGCCTTC TGCTGGCACG CGAGGCCCAG CCAGTACCAC TGGTGGCCAT CGCCAGCCTG
GCACTGCTGG CCGAGCGGGC GCAGCAGCTG GGGCTGGCCA TCGAGTTGCT GGAGGTCGGC
CCCGAACAAT GGCCGGACAG CCCGGCAGCA GCCGGCAGCC TGTATGTCTG GGATACACCG
CTCGCTGTCC CGGCGCACGC CGGCCGCCTC GATCCGGCCA ACGCCGGTTA CGTGCTGGAA
ACGCTCACCC GAGCCGGACA AGGCTGTCTG GATGGCACCT TCGCCGCGAT GATCACCGCC
CCGGTGCACA AGGGCGTGAT CAACGAGGCC GGCATCGCCT TCTCCGGGCA CACCGAGTTT
CTCGCCGAAC TGACCGCGAC CGAGCAGGTG GTGATGATGC TCGCCACCCG TGGCCTGCGC
GTGGCGCTGG TCACCACGCA CCTGCCGCTC AAGGATGTAG CCGCCGCCAT CACCGCCGAG
CGTCTGCAGC GGGTGACGCG CATTCTGCAT GCCGACCTGC AGGCCAAGTT CGGCATTGCC
GCGCCGCGCA TTCTGGTATG CGGGCTCAAC CCTCATGCGG GCGAAGGCGG TCATCTGGGC
CGCGAAGAAA TCGAGATCAT CGAGCCGACG CTGGAGCGTC TGCGTGCCGA AGGCATGAAC
CTGATCGGCC CGCTGCCGGC CGACACCCTG TTCACCCCCA AGCATCTCGA GCACGCCGAT
GCGGTGCTCG CCATGTACCA CGACCAGGGC CTGCCCGTGC TCAAGTTCAA GGGTTTCGGT
GCGGCGCTGA ACGTGACCCT GGGCCTGCCG ATCATCCGCA CCTCGGTCGA CCACGGCACC
GCGCTGGATC TGGCCGGCAG CGGCAACATC GACACCGGCA GCCTGCAGGT GGCGCTGGAA
ACCGCCTACC AGATGGCGGC AGCCACCAGC GGCAAGTCAC AAGCGGCGGG TTAA
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| Protein sequence | MNTQQRFALT PGEPAGIGPD LCLLLAREAQ PVPLVAIASL ALLAERAQQL GLAIELLEVG
PEQWPDSPAA AGSLYVWDTP LAVPAHAGRL DPANAGYVLE TLTRAGQGCL DGTFAAMITA
PVHKGVINEA GIAFSGHTEF LAELTATEQV VMMLATRGLR VALVTTHLPL KDVAAAITAE
RLQRVTRILH ADLQAKFGIA APRILVCGLN PHAGEGGHLG REEIEIIEPT LERLRAEGMN
LIGPLPADTL FTPKHLEHAD AVLAMYHDQG LPVLKFKGFG AALNVTLGLP IIRTSVDHGT
ALDLAGSGNI DTGSLQVALE TAYQMAAATS GKSQAAG
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