| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3999 |
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| Symbol | |
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| ID | 5110222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4372296 |
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| End bp | 4372970 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505262 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001189478 |
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| Protein GI | 146309013 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.79681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACCCT TCGCCATCGC CCCGTCGATC CTTTCCGCCG ACTTCGCCCG CCTGGGTGAG
GAAGTGGACA ACGTACTCGC CGCCGGGGCG GACATCGTCC ACTTCGATGT CATGGACAAC
CACTACGTGC CCAACCTGAC CATCGGCCCG ATGGTCTGTG CAGCGCTGCG CAAGTACGGC
ATCACCGCGC CGATCGATGC GCACCTGATG GTCAAGCCGG TGGATCGCAT CATCGGCGAC
TTCATCGAAG CTGGCGCCAG CTATATCACC TTCCACCCGG AAGCGTCCGA GCACATCGAC
CGTTCCCTGC AACTGATCAA GGCGGGCGGC GCCAAGGCCG GCCTGGTGTT CAACCCGGCC
ACCCCGCTGG ACGTGCTCAA GTACGTGATG GACAAGGTCG ACATGATCCT GCTGATGAGC
GTCAACCCCG GCTTCGGCGG GCAGAAGTTC ATCCCCGGTA CCCTCGACAA GCTGCGTGAA
GCCCGTGCGC TGATCGACGC CAGCGGCCGC GAGATCCGCC TGGAAATCGA CGGCGGCGTC
AACGTGCAGA ACATCCGCGA GATCGCCGAG GCGGGCGCGG ACACCTTCGT CGCTGGCTCG
GCGATCTTCA ACCAGCCGGA CTACAAGGCG GTGATCGACG CCATGCGCGC CGAACTGGCC
CAGGTGCGTG GATGA
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| Protein sequence | MQPFAIAPSI LSADFARLGE EVDNVLAAGA DIVHFDVMDN HYVPNLTIGP MVCAALRKYG
ITAPIDAHLM VKPVDRIIGD FIEAGASYIT FHPEASEHID RSLQLIKAGG AKAGLVFNPA
TPLDVLKYVM DKVDMILLMS VNPGFGGQKF IPGTLDKLRE ARALIDASGR EIRLEIDGGV
NVQNIREIAE AGADTFVAGS AIFNQPDYKA VIDAMRAELA QVRG
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