Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3992 |
Symbol | |
ID | 5110215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4365957 |
End bp | 4366865 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640505255 |
Product | hypothetical protein |
Protein accession | YP_001189471 |
Protein GI | 146309006 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.204351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0911686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTGCG AACAGTACAT CGCCAAGTCG TTCAGCAAGC ACAACAGCCA GCTGATCGAC TACATGAACG ACCTGATCGA AGACTACCAA CGCCAGGGCT ACGTGCTCAC CGTCCGCCAG CTGTACTACC AGCTGGTGGC CCGTGACGTG ATCGAGAACA CCCTGCAGTC GTACAAGCGC ACCGCCAACC TGATCAACGA CGCCAAGCTG GCCGGGCATA TGGATTGGGA CGCCATTGAG GACCGCACCC GCGAGTTCCT GACCAACCCG CATTGGGACG CCGGCAGCTC CATCCTGCGC AGCGCAGCCC AAAGCTACGG CCAGGACATG TGGGAGAATC AGGAGACTCG CGTGTTCGTA GTGATCGAGA AGGAAGCCCT GATCGGCGTC TTGACTGGCA CCTGCAGGAA ATGGGACGTG CCCATTCTGG CCGCGCGCGG CTACCCGAGC GGATCTGTCC TGCGCGGGTT CGCCGAGGAA CATCTATTGC CGGCGCTGTA CGCCGGCCAG CGGGTGCGCG TGCTGCACCT GGGCGACCAC GACCCGAGCG GCATCGACAT GACGCGCGAC CTGATCGAGC GGCTGTCGCT GTTCACTCGC CGCGAGATGG ACGATAGCGA CCTAGACCGC ATCGCCCTGA CAATGGACCA GATCGACGAG ATCAAGCCAC CAGAGAACCC GGCCAAGACC ACGGATTCGC GCTTCGCCGC GTACCGTCGC CAGTACGGCA CGAGTAGCTG GGAGCTGGAC GCGCTGTCGC CGCAGTACCT CAACGACCTG CTGGAAGGCC ATATCGAAGA CCACGTGGAC CCGGACGCAT GGGCAGAGAA GTCGGCCGAG GTTGACGCCG TGCGCAACGA CCTGCGCGAC CTGGCTCGCT CTCAGGAAGA GAAGGAGGCA CGGTCATGA
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Protein sequence | MSCEQYIAKS FSKHNSQLID YMNDLIEDYQ RQGYVLTVRQ LYYQLVARDV IENTLQSYKR TANLINDAKL AGHMDWDAIE DRTREFLTNP HWDAGSSILR SAAQSYGQDM WENQETRVFV VIEKEALIGV LTGTCRKWDV PILAARGYPS GSVLRGFAEE HLLPALYAGQ RVRVLHLGDH DPSGIDMTRD LIERLSLFTR REMDDSDLDR IALTMDQIDE IKPPENPAKT TDSRFAAYRR QYGTSSWELD ALSPQYLNDL LEGHIEDHVD PDAWAEKSAE VDAVRNDLRD LARSQEEKEA RS
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