Gene Pmen_3992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3992 
Symbol 
ID5110215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4365957 
End bp4366865 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID640505255 
Producthypothetical protein 
Protein accessionYP_001189471 
Protein GI146309006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.204351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0911686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGCG AACAGTACAT CGCCAAGTCG TTCAGCAAGC ACAACAGCCA GCTGATCGAC 
TACATGAACG ACCTGATCGA AGACTACCAA CGCCAGGGCT ACGTGCTCAC CGTCCGCCAG
CTGTACTACC AGCTGGTGGC CCGTGACGTG ATCGAGAACA CCCTGCAGTC GTACAAGCGC
ACCGCCAACC TGATCAACGA CGCCAAGCTG GCCGGGCATA TGGATTGGGA CGCCATTGAG
GACCGCACCC GCGAGTTCCT GACCAACCCG CATTGGGACG CCGGCAGCTC CATCCTGCGC
AGCGCAGCCC AAAGCTACGG CCAGGACATG TGGGAGAATC AGGAGACTCG CGTGTTCGTA
GTGATCGAGA AGGAAGCCCT GATCGGCGTC TTGACTGGCA CCTGCAGGAA ATGGGACGTG
CCCATTCTGG CCGCGCGCGG CTACCCGAGC GGATCTGTCC TGCGCGGGTT CGCCGAGGAA
CATCTATTGC CGGCGCTGTA CGCCGGCCAG CGGGTGCGCG TGCTGCACCT GGGCGACCAC
GACCCGAGCG GCATCGACAT GACGCGCGAC CTGATCGAGC GGCTGTCGCT GTTCACTCGC
CGCGAGATGG ACGATAGCGA CCTAGACCGC ATCGCCCTGA CAATGGACCA GATCGACGAG
ATCAAGCCAC CAGAGAACCC GGCCAAGACC ACGGATTCGC GCTTCGCCGC GTACCGTCGC
CAGTACGGCA CGAGTAGCTG GGAGCTGGAC GCGCTGTCGC CGCAGTACCT CAACGACCTG
CTGGAAGGCC ATATCGAAGA CCACGTGGAC CCGGACGCAT GGGCAGAGAA GTCGGCCGAG
GTTGACGCCG TGCGCAACGA CCTGCGCGAC CTGGCTCGCT CTCAGGAAGA GAAGGAGGCA
CGGTCATGA
 
Protein sequence
MSCEQYIAKS FSKHNSQLID YMNDLIEDYQ RQGYVLTVRQ LYYQLVARDV IENTLQSYKR 
TANLINDAKL AGHMDWDAIE DRTREFLTNP HWDAGSSILR SAAQSYGQDM WENQETRVFV
VIEKEALIGV LTGTCRKWDV PILAARGYPS GSVLRGFAEE HLLPALYAGQ RVRVLHLGDH
DPSGIDMTRD LIERLSLFTR REMDDSDLDR IALTMDQIDE IKPPENPAKT TDSRFAAYRR
QYGTSSWELD ALSPQYLNDL LEGHIEDHVD PDAWAEKSAE VDAVRNDLRD LARSQEEKEA
RS