Gene Pmen_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3988 
Symbol 
ID5110211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4364068 
End bp4364397 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content66% 
IMG OID640505251 
Producthypothetical protein 
Protein accessionYP_001189467 
Protein GI146309002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0146108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.105596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACG CCAACCAGCG CGAGCTTCGC CTGCCGCCAG CGCCCCGCGC GCAGACCGTC 
GAGCTGCTCT TCCGCACCTT TGGCGACGTA CTGGTGCCGG TCGACCGGCT GCGTGAGCAG
TACTTCGACA AGCTCAACGA CGACAACTTC ACCCGCGCCC TGCGTGAGCT ACGCGTGCTG
CTGCCCGTAA CCAAGCTCGA CCCCAGCGCC AAGGGCACCA AGTTCGTCGA CATCCGCCAC
CTGGCGGTCC TGATCGACAC CCAGGCCGAC GCGGCAGACG CCGAGCTGGC AGAGAAGATC
TACCCGACAG AGCAAGAGGA ACAGCCATGA
 
Protein sequence
MSHANQRELR LPPAPRAQTV ELLFRTFGDV LVPVDRLREQ YFDKLNDDNF TRALRELRVL 
LPVTKLDPSA KGTKFVDIRH LAVLIDTQAD AADAELAEKI YPTEQEEQP