Gene Pmen_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3946 
Symbol 
ID5110169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4331502 
End bp4332098 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content64% 
IMG OID640505209 
Productanthranilate synthase component II 
Protein accessionYP_001189425 
Protein GI146308960 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0512] Anthranilate/para-aminobenzoate synthases component II 
TIGRFAM ID[TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTAA TGATCGATAA TTACGACTCC TTCACCTACA ACGTCGTGCA GTACCTGGGT 
GAGCTGGGCG CCGACGTGCA CGTGATCCGC AATGACGAAC TGAGCATCGC CGAGATCGAA
GCACTGAAGC CCGAGCGCAT CGTCGTCTCG CCCGGCCCGT GCACGCCGAC CGAGGCGGGG
GTCTCCATCG AGGCCATCCT GCATTTCGCC GGCAAGTTGC CGATCCTCGG CGTCTGCCTC
GGCCACCAGA GCATCGGCCA GGCCTACGGC GGCGACGTGG TGCGCGCGCG CCAGGTGATG
CACGGCAAGA CCAGCCCGGT GTTCCATGCG GACAAGGGCG TGTTCGCCGG TCTGAACAAC
CCGCTCACCG TGACCCGCTA TCATTCTCTG GTGGTCAAGC GCGAAACCCT GCCGGACTGC
CTGGAGATCA CCGCCTGGAC CCAGCATGAC GACGGCTCGG TCGACGAGAT CATGGGCCTG
CGCCACAAGA CCCTGAATGT CGAGGGCGTG CAGTTCCACC CCGAGTCCAT CCTCACCGAG
CAGGGCCACG AACTGTTCGC CAACTTTCTC AAGCAGACCG GAGGCGTGCG CGCATGA
 
Protein sequence
MLLMIDNYDS FTYNVVQYLG ELGADVHVIR NDELSIAEIE ALKPERIVVS PGPCTPTEAG 
VSIEAILHFA GKLPILGVCL GHQSIGQAYG GDVVRARQVM HGKTSPVFHA DKGVFAGLNN
PLTVTRYHSL VVKRETLPDC LEITAWTQHD DGSVDEIMGL RHKTLNVEGV QFHPESILTE
QGHELFANFL KQTGGVRA