| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3945 |
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| Symbol | trpD |
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| ID | 5110168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4330459 |
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| End bp | 4331505 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505208 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001189424 |
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| Protein GI | 146308959 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCA AGGAAGCCCT CAACCGGATC GTCGCCCAGC TCGATCTGAC CACCGAGGAA
ATGCAGGCGG TCATGCGCGA AATCATGACC GGCCAGTGCA CCGACGCGCA GATTGGCGCC
TTCCTCATGG GCATGCGCAT GAAGAGCGAG ACCATCGACG AGATCGTCGG CGCGGCCAGC
GTCATGCGCG AGCTGGCGGC GCCGGTGGTC ATCGACGCCG AGCGCCTGGT CGACACCTGC
GGCACCGGCG GCGACGGCAT GAACATCTTC AACGTCTCCA CCGCGGCGGC CTTCGTTGTC
GCGGCGGCCG GCGGCAAGGT GGCCAAGCAC GGCAACCGTG CGGTATCCGG CAAGAGCGGT
AGCGCTGATC TGCTGGAAGC CGCCGGCGTC TACCTGGGAC TCAAGCCCGA GCAGGTGGCG
CGCTGCGTCG AGAGCGTGGG CGTCGGCTTC ATGTTCGCCC CGTCCCATCA TGGCGCGATG
AAGCATGCCA TCGGCCCGCG TCGTGAGCTG GGCCTGCGCA CCATATTCAA CATGCTCGGC
CCGATGACCA ACCCGGCTGG TGCCAGGCAT CAGGTCATCG GCGTGTTCAG CCAGGCGCTG
TGTCGGCCGA TGGCCGAAGT GCTGCAGCGC CTGGGTAGCG AGCATGTATT GGTGGTGCAC
GCGCAGGATG GCCTGGACGA GATCAGCCTG GCCGCGCCTA CCTTCGTCGC CGAGCTCAAG
GACGGCAAGG TCAGCGAGTA CCGCATCCAG CCCGAGGATT TCGCCATCAA GAGTCAGAGC
CTGATCGGCC TGACCGTCGA CAACGCCGAG CAGTCGCTGG AACTGATCCG CGACGCGCTG
GGGCGGCGCA AGACCGAGAA TGGCCAGAAG GCTGCCGACA TGATCGTGCT CAATGCAGGC
GCCGCGCTGT ACGCCGCCGA CCATGCCAGC AGTCTGCGCG AAGGCGTGCA GCTGGCGCAC
GATGCCTTGC ACACCGGGCT GGCGCGCGAG AAGCTGGAGG AGCTGGTGTC CCTTACCGCG
GTATTCAAAC AGGAGAACGA AGGGTGA
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| Protein sequence | MNIKEALNRI VAQLDLTTEE MQAVMREIMT GQCTDAQIGA FLMGMRMKSE TIDEIVGAAS
VMRELAAPVV IDAERLVDTC GTGGDGMNIF NVSTAAAFVV AAAGGKVAKH GNRAVSGKSG
SADLLEAAGV YLGLKPEQVA RCVESVGVGF MFAPSHHGAM KHAIGPRREL GLRTIFNMLG
PMTNPAGARH QVIGVFSQAL CRPMAEVLQR LGSEHVLVVH AQDGLDEISL AAPTFVAELK
DGKVSEYRIQ PEDFAIKSQS LIGLTVDNAE QSLELIRDAL GRRKTENGQK AADMIVLNAG
AALYAADHAS SLREGVQLAH DALHTGLARE KLEELVSLTA VFKQENEG
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