| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3904 |
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| Symbol | rplV |
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| ID | 5106438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4283548 |
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| End bp | 4283880 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640505158 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001189383 |
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| Protein GI | 146308918 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.321312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGTAG CCGCTAAGTT GTCGGGCGCT CGCATCTCCG CCCAGAAAGC TCGCCTGGTC
GCCGACCAGA TCCGCGGGAA GAAGGTGGGC GAAGCGCTCA ACCTGCTGGC TTTCAGCAGC
AAGAAAGCCG CCGAGATCAT GAAGAAAGTG CTGGAGTCGG CCGTTGCCAA CGCCGAGCAC
AACGAAGGCG CAGACGTTGA TGACCTGAAG GTCAGCACCG TTTTCGTCAA CGAAGGGCGT
TCGCTTAAGC GCATCATGCC GCGTGCCAAG GGCCGTGCTG ATCGCATCGT CAAGCGGTCT
TGCCATATCA CTGTCAAGGT TGCGGACAAG TAA
|
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| Protein sequence | MEVAAKLSGA RISAQKARLV ADQIRGKKVG EALNLLAFSS KKAAEIMKKV LESAVANAEH
NEGADVDDLK VSTVFVNEGR SLKRIMPRAK GRADRIVKRS CHITVKVADK
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