| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3875 |
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| Symbol | |
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| ID | 5106409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4261486 |
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| End bp | 4262370 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505129 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001189354 |
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| Protein GI | 146308889 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.400709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATGC GCCTGATGCT GCTGGGCGGC GGTAGTGCCC TGGGGCATGC GCTGATTCGG
CTCGGCGCCG AGGAGGACAT CGGCTTCCTG GCGCCCAGGC CGCCCGAGTC GGGCTGGGAT
GCCGCCAGCC TGACCGAGCT GCTCGATGAA ACCCGCCCCG ATGCCCTGGT CAACCTGGCC
TATTACTTCG ACTGGTTCCA GGCCGAATCG GTGGCCGAGT CGCGCCTGCA GACTCAGGAG
CGTGCAGTGG AGCGCCTGGC CGAGCTGTGC CAGCACCACG GCATCGTCCT GCTGCAGCCT
TCCAGCTATC GGGTCTTCGA CGGCTCGCGT GCCACCGCCT ACAGCGAGAA GGAAGAACCG
GTGCCACTTG GCCTGCGTGG CCAGGCACTG TGGCGCCTGG AGCAGAGCGT GCGGGCGATC
TGCCCGCGGC ATGTGCTGCT GCGCTTCGGC TGGCTGCTCG ACGACAGTCG CGAAGGCCTG
CTCGGGCGCT TTCTGCAGCG CGCCGAGCGC GACGACGCGC TGTACCTGGC CGATGACCGG
CGCGGCAATC CGACACCGGT GGATGACGCG GCGCGGGTGA TTCTCGCGGT GCTCAAGCAG
CTCGATTGCG AGTCTCCCCT GTGGGGCACC TACCATTATG GTGGTCACGA GGCGAGCACC
TCGCTGAGTC TGGGCCAGGC GGTGCTGAGC GAGGCACGTC ACTACCGCAG CAATCTGGTC
GAGGACATCG CGCCGCAGGC GCACGCCGCG CGTCCAGACG CAGCCGATGA GCCGCAACAC
GCGGTGCTGG CTTGCAAGAA GATTCTTCAC ACCTTCGGCA TCAAGCCGCG CGCCTGGCGT
GCCGGTCTGC CGAGCCTGTT GGACCGTTAT TACCGTCATG GCTGA
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| Protein sequence | MRMRLMLLGG GSALGHALIR LGAEEDIGFL APRPPESGWD AASLTELLDE TRPDALVNLA
YYFDWFQAES VAESRLQTQE RAVERLAELC QHHGIVLLQP SSYRVFDGSR ATAYSEKEEP
VPLGLRGQAL WRLEQSVRAI CPRHVLLRFG WLLDDSREGL LGRFLQRAER DDALYLADDR
RGNPTPVDDA ARVILAVLKQ LDCESPLWGT YHYGGHEAST SLSLGQAVLS EARHYRSNLV
EDIAPQAHAA RPDAADEPQH AVLACKKILH TFGIKPRAWR AGLPSLLDRY YRHG
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