Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3865 |
Symbol | |
ID | 5106399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4252521 |
End bp | 4253786 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640505119 |
Product | hypothetical protein |
Protein accession | YP_001189344 |
Protein GI | 146308879 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCTGA TCCGCATCGC CCTGGCCAGC CTGGCCAACC GCCGCTTCAC CGCCCTGCTC ACGGTATTCG CCATTGCCCT GTCGGTCTGC CTGCTGCTGG CCGTCGAACG CGTGCGCACC GAAGCGCGCG CCAGTTTCGC CAACACCATC AGCGGCACCG ATCTGATCGT CGGCGCCCGC TCGGGCAGCG TGAACCTGCT GCTGTACTCG GTGTTTCGCA TCGGCAACGC CACCAACAAC ATCCGCTGGG ACAGCTTCGA GCGCTTCGCC AACCACCGCC AAGTGAAATG GGCCATTCCC ATCTCGCTGG GCGACTCGCA CCGCGGCTAC CGGGTGATGG GCACCAGCAC CGCCTACTTC GAACACTATC GCTACGCCCG CAGCCAGGCG CTGAAACTGG CCCAGGGCCG CGCCTTCGCC GACGATCCCT TCGAGGTGGT GCTCGGCGCC GAGGTGGCCC AGGCCCTGGG CTACGGCCTG GGCGAGGAGA TCGTCCTGGC CCACGGGGTC GCCACCATCA GCCTGCTCAA GCACGACGAC AAGCCGTTCA CCGTGGTCGG CGTTCTCGAG CGCACCGGCA CACCGGTGGA CCGTACCCTG CACATCTCCC TGGCCGGGAT GGAAGCGCTG CACATCGACT GGCAGAACGG TATGCCGGCG CGCGGTGCGG CGCAGATCAG CGCCGAGCAG GCACGCACCA TGGACCTGCA GCCGAAGCAG ATCACGGCGT TCATGCTCGG CCTCAACAGC AAGATCGCGA CGTTCAGCCT GCAACGCGAG ATCAACGAGT TTCGCGGCGA GCCGCTGCTG GCGATCCTGC CCGGCGTCGC CCTGCAGGAG CTGTGGAGCT TGATGGGCAC CGCCGAACAG GCGCTGTTCG TGGTCTCGCT GTTCGTCGTG CTCACCGGTC TGATCGGCAT GCTGACGGCA ATCCTCACCA GCCTCAACGA ACGCCGCCGG GAAATGGCCA TCCTGCGCTC GGTGGGCGCA CGTCCCTGGC ATATCGCCAG CCTGCTGGTG CTGGAAGCCT TTGCCCTGGC GCTGGCCGGC GTGGCGCTCG GCCTGGCCCT GCTGTACCTC GGTATCGCCG GCAGCCAGGG CTACGTACAG GCCAACTACG GCCTGTACCT GGCATTGAGC GCCCCCACCC GCTACGAATG GACCCTGCTG GCCGGGATTC TCGGCGCCGC CCTGCTGATG GGCAGCGTGC CGGCCTGGCG CGCCTATCGG CAGTCGCTGG CCGATGGTCT GTCGATCAGG CTCTGA
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Protein sequence | MHLIRIALAS LANRRFTALL TVFAIALSVC LLLAVERVRT EARASFANTI SGTDLIVGAR SGSVNLLLYS VFRIGNATNN IRWDSFERFA NHRQVKWAIP ISLGDSHRGY RVMGTSTAYF EHYRYARSQA LKLAQGRAFA DDPFEVVLGA EVAQALGYGL GEEIVLAHGV ATISLLKHDD KPFTVVGVLE RTGTPVDRTL HISLAGMEAL HIDWQNGMPA RGAAQISAEQ ARTMDLQPKQ ITAFMLGLNS KIATFSLQRE INEFRGEPLL AILPGVALQE LWSLMGTAEQ ALFVVSLFVV LTGLIGMLTA ILTSLNERRR EMAILRSVGA RPWHIASLLV LEAFALALAG VALGLALLYL GIAGSQGYVQ ANYGLYLALS APTRYEWTLL AGILGAALLM GSVPAWRAYR QSLADGLSIR L
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