| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3849 |
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| Symbol | |
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| ID | 5106079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4240499 |
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| End bp | 4241143 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505103 |
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| Product | aspartyl protease-like protein |
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| Protein accession | YP_001189328 |
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| Protein GI | 146308863 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTTC GTTACTGTCT CGCCGGTTTC GCCCTGCTGT GTGCGGGTCT GGCCTGGGCT
GCCAGCCAGG TGCAGGTGGT CGGCCTGTTT CCCGGTGCGG CGGTGCTCAA TGTCGACGGC
CAGCGCAAGC TGGTGCGGGT CGGCCAGACC GGGCCGGGCG GGGTGCAGGT GGTCAGCGTC
GACAAGCAGG GTGCGGTGTT GCGCGTCGAA GGTGTCGAGC GCGTCTATCC GCTGAGCCGG
GAATACAGCG CCGGTTTCGC CGAACCGGTC AGAAAGCGCC TGAGCATCGC CAAGGGCATC
GGCGGCCATT ACTGGGTGGC CGGTTCGGTC AACGGTCAGA CGGTGCAGTT TCTGGTGGAC
ACCGGCGCCA CCTCGGTGGC GCTCAACGAT GCGCATGCCC GTCGCCTGGG CATCGATTAC
CGGGTCAGCG GCCGGCCCCT GCAGGTCAAT ACCGCCAGTG GCGTCGCGCG TGGCTGGCGG
GTCGTGCTTG ACCGGGTCAA GGTCGGCGAC CTGGAGGTGC TCGGCGTCGA GGCCGTGGTG
CTGGAAGGCA ACGCACCGCA CGAGGCGCTG CTGGGCATGA GCTTCCTGGG GCGGGTCGGC
TGGCGCGAGG AGCAGGGGAT GCTGGTGCTC GAGTCCAAGC TCTAG
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| Protein sequence | MLFRYCLAGF ALLCAGLAWA ASQVQVVGLF PGAAVLNVDG QRKLVRVGQT GPGGVQVVSV
DKQGAVLRVE GVERVYPLSR EYSAGFAEPV RKRLSIAKGI GGHYWVAGSV NGQTVQFLVD
TGATSVALND AHARRLGIDY RVSGRPLQVN TASGVARGWR VVLDRVKVGD LEVLGVEAVV
LEGNAPHEAL LGMSFLGRVG WREEQGMLVL ESKL
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