| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3764 |
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| Symbol | |
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| ID | 5105759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4150247 |
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| End bp | 4151896 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505019 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001189244 |
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| Protein GI | 146308779 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.598594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0554036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCA GTCTGCACGC CGAAACCCAT GAGGTCTTCA ACCAGGTGCC CAGCCTTGAC
GGCGCCAACC TCTACCGTCT CGATCTGCCG CTGCAGGAGT GGGTCCGCCG CTACGATGGC
GCCTGGGCGG AAGAACGTCT GAGCGCCTAT GGCGCGCTGG CCGGCGGCGC GCTGATGCAG
GCGGGCTTTC TCGCCAACGA GAACAAGCCG GTGTTCAAGA GCCATGACCG CTACGGCAAC
CGCATCGACC TGGTGGAATT CCACCCGGCC TATCACGAGC TGATGCGCAC GGCCATCGAG
CACGGCCTGC CGTCGCTGCC CTGGACCGAC CCGCGCGCCG GTGCCCATGT CGCCCGCGCC
GGGCTTTCCT ATCTGCACAG CCAGGCCGAG TCGGCCAGCG GCTGCCCGCT GACCATGACC
TTCGCCGCCG TGCCGGCCAT TCGCCTGCAG CCCAATGTGG CCGAGCAGTG GCTGCCAAAG
ATCCTTGCCA GCGAGTACGA CCCGCGCAAC CTGCCGATGG AGCAGAAGGC CGGCGTCACC
ATCGGCATGG CCATGACCGA GAAACAGGGC GGCACCGACG TGCGCGCCAA TACCACCCGT
GCCTATCCCA TCGGCCTTGG CGGGCCGGGG CAGGGCTACG AGCTGGTCGG TCACAAGTGG
TTCTGCTCGG CGCCGATGTG CGATGCCTTC CTCACCCTGG CCTATACCGA CAAGGGGTTG
AGCTGCTTCC TGCTACCGCG CCATCGCCCG GATGGCACGC GCAACCAGTT CTACATCCAG
CGCCTGAAGA ACAAGCTGGG CAACTGGGCC AACGCCTCCA GCGAAGTGGA ATACCGCGGC
GCCTTCGCCT GGATGCTCGG CGAGGAAGGG CGCGGCGTGC CCACCATCAT CGAGATGGTG
GCCATGACCC GCTTCGACTG CATGGTCGGC TCCAGCAGCC TGATGCGCCA GGCGCTGACC
CAGGCCGCGC ACCACTGCGC GCATCGCCAG GTGGGCGGCA AGCTGCTCGC CGACCAGCCG
CTGATGCAGA ACGTGCTGGC CGATCTGGCC CTGGAGAGCG AGGCCGCGCT GGCGCTGTGC
ATGCGCATGG GCCGCGCGCT CGATCATCTG CATGACGAGC AGGAAGACAA GTTCGCCCGC
CTGGTCACTG CGGTGGGCAA GTACTGGATC TGCAAGCGCG CCCCGGAAAT GGTCTACGAG
GCCAGCGAAT GCATGGGCGG CGCCGGCTAC GTCGAGGAAA CCATCATGCC GCGCCTGTAT
CGCGAAGCGC CGGTCAACTC GATCTGGGAA GGCTCGGGCA ACGTGCAGTG CCTGGACGTG
CTGCGCGCGC TGTCCAAGGA GCCGGGCGTG CTCGATGCCC TGTTCGATGA GCTGGGTGAC
GGCCACGGCG ATGCACGGCT GAAGGCGCAT ATCCAGCGAC TGAAAACCGA CTTCAGCGAC
ACCGCCGACA TCCAGTACCG CGCCCGCCAG CTGACCGAGG ACATGGCCGT GGCGCTGCAG
GCCAAGCTGT TGCTGGAGGC CGGCAACAGC GTGGTCAGCG ACGCCTTTAT CGCCAGCCGC
CTGGAAGGCC GCGGCCGCGT CTACGGCACC CTGCCGCGCG GCGTCGACGT CGAGGCGCTG
GTGGCGCGCA GCACGCCGCA TCTGCTTTGA
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| Protein sequence | MKPSLHAETH EVFNQVPSLD GANLYRLDLP LQEWVRRYDG AWAEERLSAY GALAGGALMQ
AGFLANENKP VFKSHDRYGN RIDLVEFHPA YHELMRTAIE HGLPSLPWTD PRAGAHVARA
GLSYLHSQAE SASGCPLTMT FAAVPAIRLQ PNVAEQWLPK ILASEYDPRN LPMEQKAGVT
IGMAMTEKQG GTDVRANTTR AYPIGLGGPG QGYELVGHKW FCSAPMCDAF LTLAYTDKGL
SCFLLPRHRP DGTRNQFYIQ RLKNKLGNWA NASSEVEYRG AFAWMLGEEG RGVPTIIEMV
AMTRFDCMVG SSSLMRQALT QAAHHCAHRQ VGGKLLADQP LMQNVLADLA LESEAALALC
MRMGRALDHL HDEQEDKFAR LVTAVGKYWI CKRAPEMVYE ASECMGGAGY VEETIMPRLY
REAPVNSIWE GSGNVQCLDV LRALSKEPGV LDALFDELGD GHGDARLKAH IQRLKTDFSD
TADIQYRARQ LTEDMAVALQ AKLLLEAGNS VVSDAFIASR LEGRGRVYGT LPRGVDVEAL
VARSTPHLL
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