Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3720 |
Symbol | |
ID | 5105715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4105850 |
End bp | 4107472 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640504975 |
Product | hypothetical protein |
Protein accession | YP_001189200 |
Protein GI | 146308735 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03605] SagB-type dehydrogenase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGATG TGCTCGCCTA TCACCAGCTC AGCAAGCATG CGCCGGAACG CTTCGCGCCG GGGCCGGGGC AACTGGACTG GGCAACCCAG CCGGCGCCGT TTCGCCGTTA TGCGGGGGCG CGGCTGATCG AGCTGTACCA CCGCCCGCTG GAAGAAGGGC CGGGCTACGA CACGGCATTC GCCGGGCCGC AGACGCCGCC TGCGCCGCTG AATCGCGCCA GCGTCTCGCA ATTGCTGTAC GACAGCCTGG CCATTTCCGC CTGGAAGGAA GCCGGCGGCA ATCGCTGGGC GCTGCGGGTC AACCCGTCAT CCGGCAACCT GCACCCGACC GAGGCCTATC TGCTGTTGCC ACCGGATGCC GTGGATGAGC TCGCTGTGCT GGCCCACTAT GCCCCGGATG TCCATGCGCT GGAGGTACGC AGCGAGCTGC CCGCGCCGCT TGGCCGGCAG CTGGCGAGCA GCCTGCCGCC CGGTGGTTTT CTCCTGGGGC TGAGCAGCAT CGCCTGGCGC GAGGCCTGGA AGTACGGCGA GCGCGCCTAC CGCTACTGCC AGCACGACCT GGGGCACGCC CTGGCGGCGT TGGCCATTGC CGCCAGCGTG CAGGGCTGGC AGGTGCGCAT GCTGCATGGC GTGGCCGAAG CGCGTCTGGA CGGCCTGCTG GGGCTGGACG ATGAGGGCTT TCACGAAGCC GAACACGGCG ACTGCCTGCT GTGGATCGGC CCGGCGCAAG CGATGGAAAT CGCGCTGCCC GAAACCCTGC TTAACGGGTT GGCGCAGCTA GAGCGGGTCG GAGCGCCCAA TCGTCTGTCG CGCGAGTATC GCCACTGGCC GGAGCTGCAG CGGGTGCATG GGCTGTGCCG CGCGCCGGCA CGTCCTCGCG CCGTCTGGAA CCTGGATGCG GCCGACGCAC GGGCCGACAA CCCCGGCCTG CCACTGCGGC CGATCCTGCA TCGCCGACGC AGTGCGCAGG CCATGGATGG CCGCAGCGGC ATTCAGGCGT CACTGCTGCT GGCCTGGCTG CGCCGGCTGA TGCCGCCGCA GTCGCAGGTG CCCTTCGCCG TGAGCGGTGA GCCGAGCGAG ATCGACCTGC TGCTGTTCGT CCACCGCGTG CAGGGCTTGG CGCCGGGGCT GTACTGGCTG GATCGCACAG GCAGCGGGGT GCAGCCACTG CGCGAGGATT ACCAATGGCT GCGGGTGGAT GACGAGCTGC CGCTGTACCG TCTGCTCGAA GGTGACGCCC GTGGTCTGGC GGGCTTTCTC AGTTGCGGCC AGGACATCGC CGCCGATGGC TGCGTGGCCT TGGCCATGCT GGCGCGGGTG GAGCGCGCCC TGGCCAATGG CGCCTGGCGC TATCCCAGGC TCTACTGGGA ATGTGGCCAG ATCGGTCAGT TGCTCTATCT GGAAGCCGAA GCGGCAGGGC TTTCCGGTAC GGGCATCGGT TGCTACTTCG ACGACGCCTT GCGCGAGTTG CTCGGCGATG CCGACAGCGG GCTGCAAAGT CTTTACCATT TCACCCTTGG CCGCGCCGTT TGGGATGAAC GCCTGACATC GCTGCCGGCC TACCCGCAAC TGCGTATACC CCCGTGCAAG GAGACGATAC CCCATGACTC AGGTTCTCGA TGA
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Protein sequence | MKDVLAYHQL SKHAPERFAP GPGQLDWATQ PAPFRRYAGA RLIELYHRPL EEGPGYDTAF AGPQTPPAPL NRASVSQLLY DSLAISAWKE AGGNRWALRV NPSSGNLHPT EAYLLLPPDA VDELAVLAHY APDVHALEVR SELPAPLGRQ LASSLPPGGF LLGLSSIAWR EAWKYGERAY RYCQHDLGHA LAALAIAASV QGWQVRMLHG VAEARLDGLL GLDDEGFHEA EHGDCLLWIG PAQAMEIALP ETLLNGLAQL ERVGAPNRLS REYRHWPELQ RVHGLCRAPA RPRAVWNLDA ADARADNPGL PLRPILHRRR SAQAMDGRSG IQASLLLAWL RRLMPPQSQV PFAVSGEPSE IDLLLFVHRV QGLAPGLYWL DRTGSGVQPL REDYQWLRVD DELPLYRLLE GDARGLAGFL SCGQDIAADG CVALAMLARV ERALANGAWR YPRLYWECGQ IGQLLYLEAE AAGLSGTGIG CYFDDALREL LGDADSGLQS LYHFTLGRAV WDERLTSLPA YPQLRIPPCK ETIPHDSGSR
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