Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3701 |
Symbol | |
ID | 5105696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4085245 |
End bp | 4085802 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640504956 |
Product | hypothetical protein |
Protein accession | YP_001189181 |
Protein GI | 146308716 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5661] Predicted secreted Zn-dependent protease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGG CCCTGCTGCT TCTGCTGGTG CTGGCGAGCG CGGCGCAGGC CGAGGTGCTG GACCGTCTGC ACTATCGCTA CTACGACGCC CACCTTCACA GCGGCGAATC GCTGAGCCAG GCGCTTGCGC GGGCCTCCCC CATCCGCGAG CAGGGCCAGG TGTTCCATGG CTACACCCGC TGGCGCGTGG ACTGGCGCTT CTGGTGGCAG GAGGAGCGCG ACGGCCGCTG CCGCATCCCC CTGACCCGCA CCCGTCTCGA CACCGAGATC ACCCTGCCGC GCCTCGCCGG CGGCGATGCC CAGCAGCGCC AGCGTTTCGA GCAGTATCTG GCCGCGCTGC GCGAGCACGA GCTGGGCCAT TACCGCATCG GTCAGGCGGC GGCCGCCGAG ATCGACGCCG TGCTGCTGGA TACGCCCGAG TATCCCAGCT GCAACGAGCT GCAGCGCCAG GCCAACCAGC GCGCCAATGC CGTGCTGCAG CGCCATGTGC AGGACGAGCG ACGCTACGAC CGGGACACCG GCCATGGCCG CAGCCAGGGC GCCTGGTTGA CGGACTAA
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Protein sequence | MKQALLLLLV LASAAQAEVL DRLHYRYYDA HLHSGESLSQ ALARASPIRE QGQVFHGYTR WRVDWRFWWQ EERDGRCRIP LTRTRLDTEI TLPRLAGGDA QQRQRFEQYL AALREHELGH YRIGQAAAAE IDAVLLDTPE YPSCNELQRQ ANQRANAVLQ RHVQDERRYD RDTGHGRSQG AWLTD
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