Gene Pmen_3701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3701 
Symbol 
ID5105696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4085245 
End bp4085802 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content70% 
IMG OID640504956 
Producthypothetical protein 
Protein accessionYP_001189181 
Protein GI146308716 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5661] Predicted secreted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG CCCTGCTGCT TCTGCTGGTG CTGGCGAGCG CGGCGCAGGC CGAGGTGCTG 
GACCGTCTGC ACTATCGCTA CTACGACGCC CACCTTCACA GCGGCGAATC GCTGAGCCAG
GCGCTTGCGC GGGCCTCCCC CATCCGCGAG CAGGGCCAGG TGTTCCATGG CTACACCCGC
TGGCGCGTGG ACTGGCGCTT CTGGTGGCAG GAGGAGCGCG ACGGCCGCTG CCGCATCCCC
CTGACCCGCA CCCGTCTCGA CACCGAGATC ACCCTGCCGC GCCTCGCCGG CGGCGATGCC
CAGCAGCGCC AGCGTTTCGA GCAGTATCTG GCCGCGCTGC GCGAGCACGA GCTGGGCCAT
TACCGCATCG GTCAGGCGGC GGCCGCCGAG ATCGACGCCG TGCTGCTGGA TACGCCCGAG
TATCCCAGCT GCAACGAGCT GCAGCGCCAG GCCAACCAGC GCGCCAATGC CGTGCTGCAG
CGCCATGTGC AGGACGAGCG ACGCTACGAC CGGGACACCG GCCATGGCCG CAGCCAGGGC
GCCTGGTTGA CGGACTAA
 
Protein sequence
MKQALLLLLV LASAAQAEVL DRLHYRYYDA HLHSGESLSQ ALARASPIRE QGQVFHGYTR 
WRVDWRFWWQ EERDGRCRIP LTRTRLDTEI TLPRLAGGDA QQRQRFEQYL AALREHELGH
YRIGQAAAAE IDAVLLDTPE YPSCNELQRQ ANQRANAVLQ RHVQDERRYD RDTGHGRSQG
AWLTD