Gene Pmen_3672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3672 
Symbol 
ID5110133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4057582 
End bp4058745 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content65% 
IMG OID640504927 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001189152 
Protein GI146308687 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGCG CATTCGATGC CATCCGACCC TATGCCGATG CAGAAGTGCG CCCCGTTCTG 
GCGCGCCTGC TCGCCGACCA GGCGTTTCTC GGCACCCTTA CCCGCTTCCG TTTTCCGCGC
CTGGCCGGGC CACTGGGCTG GCTGCTCAAG CCGCTGATCG CCGCGCGCCT GCGCAGCGAG
TTCGCCAGCA TCGATTCGGT CTCCAAGCTG CAGGAAAAGA TCGAGCCCTA CATAGACCGC
ACCATCGAGC ACGCCAGCGA CGGCATCAGC TACTCCGGCC TGGAGCACCT GCAGCCGGGC
AAGCCCTATC TGTATCTGGC CAACCATCGC GACATCGTCA TGGACCCGGC CTTCGTCAAC
TACGCCGTCT ACCATGCCGG CCTGCAGACG CCGCGCATCG CCATTGGCGA CAACCTGCTG
CAACGCCCCT TCGTCAGCGA TCTGATGCGC CTGAACAAGA GCTTCATCGT GCACCGCTCG
ATCAGCGGCC GCCGCGAGAA GCTGGCGGCG TACCAGTTGC TCTCCGCCTA CATCAACCAC
TCGATCCGCG AAGACGGCGA ATCGATCTGG ATCGCCCAGG CCGAAGGCCG TGCCAAGGAC
GGTGACGACC GTACCGACTC GGCGATCCTC AAGATGTTCC ACATGAGCCG CAAGGACGAG
CCGTTCGCTG CGGTGATCGA CTCGCTCAAC CTGATCCCGG TTTCGATCAG CTACGAATAC
GACCCCTGCG ACCTGGCCAA GGCACGCGAG CTGAGCGTGC GCGCCGCCAC CGGCAGCTAT
ACCAAGGCGC CGGGTGAAGA CGACGCCAGC ATCGCCCTGG GCATCACCGG CTACAAGGGC
CGCGTGCACC TGCACTTCGG CCCGCCGGTC GCCGGTCTGG AGGACACCAA GCAGCTCGCG
CAGGCGCTGG ACCGACACAT CCTCGGCCAG TACCGCCTGT TCCCGGTGCA TTACCTGGCC
TATGCCATGT GGGACAGTCG CGAGGCCGAA CTGAACGTAC CCGCGGCGCA TGAACTGTTC
GCAGCCGAGG AGCTGGCCAA GGCCGAAGCC CAATGGAACA AGCGCCTGGC CGCCTGCAGC
GCCGAAGAGA AACCGTTCCT GATCCTGCAA TACGCCAACC CGGTGCGAAA CCAGTACCGG
ATCAAGGCCG GCCTGACCCT GTAA
 
Protein sequence
MMGAFDAIRP YADAEVRPVL ARLLADQAFL GTLTRFRFPR LAGPLGWLLK PLIAARLRSE 
FASIDSVSKL QEKIEPYIDR TIEHASDGIS YSGLEHLQPG KPYLYLANHR DIVMDPAFVN
YAVYHAGLQT PRIAIGDNLL QRPFVSDLMR LNKSFIVHRS ISGRREKLAA YQLLSAYINH
SIREDGESIW IAQAEGRAKD GDDRTDSAIL KMFHMSRKDE PFAAVIDSLN LIPVSISYEY
DPCDLAKARE LSVRAATGSY TKAPGEDDAS IALGITGYKG RVHLHFGPPV AGLEDTKQLA
QALDRHILGQ YRLFPVHYLA YAMWDSREAE LNVPAAHELF AAEELAKAEA QWNKRLAACS
AEEKPFLILQ YANPVRNQYR IKAGLTL