Gene Pmen_3642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3642 
Symbol 
ID5110103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4019983 
End bp4020468 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content64% 
IMG OID640504897 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_001189122 
Protein GI146308657 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG CCGCCAACAA GGCCGTCTCC ATCGACTATA CCCTGACCAA CGATGCCGGT 
GAGGTGATCG ACAGCTCGGC TGGCGGAGCA CCGCTGGTCT ATCTGCATGG TGCGGGCAAC
ATCATCGTCG GCCTGGAAAA GGCCCTGGTC GGCAAGAAGG CCGGTGACGA GGTCGAAGTG
GCCGTCGAGC CGGAAGAAGC CTACGGCGAG TACAGCGCCG AGCTGGTTGC CACCCTGAGC
CGCGCCATGT TCGAAGGCGT CGACACCCTG GAAGTCGGCA TGCAGTTCCA TGCCTCCGGC
CCGGACGGCA GCATGCAGAT CGTCACCATC CGCGATATCG ACGGCGACGA CGTGACCGTC
GACGGCAACC ACCCGCTGGC CGGTCAGCGC CTGAACTTCA AGGTCAAGGT GGTGAACGTG
CGTGACGCCA GCGAAGAGGA AGTGGCCCAC GGTCACATCC ACGGTGAAGG CGGCCATCAC
CACTGA
 
Protein sequence
MLIAANKAVS IDYTLTNDAG EVIDSSAGGA PLVYLHGAGN IIVGLEKALV GKKAGDEVEV 
AVEPEEAYGE YSAELVATLS RAMFEGVDTL EVGMQFHASG PDGSMQIVTI RDIDGDDVTV
DGNHPLAGQR LNFKVKVVNV RDASEEEVAH GHIHGEGGHH H