Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3641 |
Symbol | |
ID | 5110102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4019322 |
End bp | 4019807 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640504896 |
Product | peroxiredoxin |
Protein accession | YP_001189121 |
Protein GI | 146308656 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCT TTCACGATCT CAATCTCCGT GCCCTGGATG GCCAGGAACT GCCGCTGGCA CCCTACAAGG GCCAGGTGGT GCTGGTGGTC AACGTCGCCT CCAAATGCGG CCTGACGCCT CAGTACGCCG GGCTGGAGAA GCTCTACCAG CAGTACAAGG GCAACGGTTT CACCGTGCTC GGTGTGCCCT GCAACCAGTT CGCCGGGCAG GAGCCAGGCA GCGAGGACGA GATTCGCGAA TTCTGCAGCC TCAATTACGG CGTGACCTTC CCACTGGGCA GCAAGCTGGA GGTCAACGGC CCCGCTCGCC ACCCGCTGTA TCGCCTGCTG GCCGGTGAGG GCGCCGAGTT TCCCGGCGAC ATCACCTGGA ATTTCGAGAA GTTCCTGGTC GGCCAGGACG GGCGCGTGCT GGCGCGCTTC TCGCCGCGCA CCACGCCGGA CGATCCGGCG CTGATCCAGG CCATCGAGAA GGCGCTGGGT CTGTAG
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Protein sequence | MSAFHDLNLR ALDGQELPLA PYKGQVVLVV NVASKCGLTP QYAGLEKLYQ QYKGNGFTVL GVPCNQFAGQ EPGSEDEIRE FCSLNYGVTF PLGSKLEVNG PARHPLYRLL AGEGAEFPGD ITWNFEKFLV GQDGRVLARF SPRTTPDDPA LIQAIEKALG L
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