Gene Pmen_3641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3641 
Symbol 
ID5110102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4019322 
End bp4019807 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content65% 
IMG OID640504896 
Productperoxiredoxin 
Protein accessionYP_001189121 
Protein GI146308656 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCT TTCACGATCT CAATCTCCGT GCCCTGGATG GCCAGGAACT GCCGCTGGCA 
CCCTACAAGG GCCAGGTGGT GCTGGTGGTC AACGTCGCCT CCAAATGCGG CCTGACGCCT
CAGTACGCCG GGCTGGAGAA GCTCTACCAG CAGTACAAGG GCAACGGTTT CACCGTGCTC
GGTGTGCCCT GCAACCAGTT CGCCGGGCAG GAGCCAGGCA GCGAGGACGA GATTCGCGAA
TTCTGCAGCC TCAATTACGG CGTGACCTTC CCACTGGGCA GCAAGCTGGA GGTCAACGGC
CCCGCTCGCC ACCCGCTGTA TCGCCTGCTG GCCGGTGAGG GCGCCGAGTT TCCCGGCGAC
ATCACCTGGA ATTTCGAGAA GTTCCTGGTC GGCCAGGACG GGCGCGTGCT GGCGCGCTTC
TCGCCGCGCA CCACGCCGGA CGATCCGGCG CTGATCCAGG CCATCGAGAA GGCGCTGGGT
CTGTAG
 
Protein sequence
MSAFHDLNLR ALDGQELPLA PYKGQVVLVV NVASKCGLTP QYAGLEKLYQ QYKGNGFTVL 
GVPCNQFAGQ EPGSEDEIRE FCSLNYGVTF PLGSKLEVNG PARHPLYRLL AGEGAEFPGD
ITWNFEKFLV GQDGRVLARF SPRTTPDDPA LIQAIEKALG L