| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3534 |
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| Symbol | |
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| ID | 5106002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3895096 |
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| End bp | 3896925 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640504787 |
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| Product | citrate transporter |
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| Protein accession | YP_001189014 |
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| Protein GI | 146308549 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.433375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGG ACCTGCTCTG GGTGCTGGCC TTGCTGGCCG GCGCCGTCAC CCTCTTCGTC
ATCGGCAGGC CACGCATGGA CGTGGTCGCT CTGCTGGTGC TGGTCGCCCT GCCGCTGACC
GGTGTGCTCG ACCTGCAACA GACCCTGGCC GGCTTCAGCG ACGCCAACGT CATCCTGATT
GCCGCGCTGT TCGTCATCGG CGATGGCCTG GTGCGCACCG GCATCGCCTA CCGTCTGGGC
GACTGGCTGG TGGCGAAGGC CGGCAGCAGC GAGACGCGCC TGCTGATCCT GCTGATGCTG
GCGGTGGCCG GGCTGGGTTC GGTGATGAGC TCCACCGGGG TGGTGGCGAT TTTCATCCCC
GTGGTGCTCG GCGTGGCTGC GCGCCTGCGC ATCGCCCCGG CGCGGCTGAT GATGCCGCTG
GCCTTCGCCG GGCTGATCAG CGGCATGCTC ACCCTGGTGG CCACCCCGCC GAACCTGGTG
GTGCACGCCG AGCTGCGCCG CGCCGGTCTG GACGGCTTCG GCTTTTTCGA TTTCACCCCC
ATCGGCCTGG CCGTGCTGGT GCTGGGTATC GGCTACATGC TGCTGGCGCG ACGCTGGCTG
GTGCGCAAGG GCGCCGGTGA CGCTGCCGAG CCGCCACGCC TGACCCTGGC CGACCTGGCC
GAGCGCTACC GCCTGGGCGA ACGCGAGCGG CGCCTACAGG TGCGTGCCGA CTCGCCCCTG
GCCAACCAGG TGCTCAACGA ACTGGCCCTG CGTCGCGATC ACGGCATCAA TGTCATCGCC
ATCGAGCGCC GCCAGCGCCT GCGTACCCTG CTGCTGATGG CCAGCGGCAA TACCCTGCTG
GAGCCGGGCG ACGTGCTGCT GGTGGACATC GCCAGCCCCA CCATCGGCCT GCTCGGCAGC
TACCAGGCGC TGGGCCTGGA ACCCATGCCG CTGCCGCATT CGTACTTCAG CCTGCATGCC
CATGAGCTGG GCCTGGCCGA GGTGGCGCTG CCGCCGGAGT CGCAACTACC CGGCAAGACC
ATTCAGGAAC TGGGCTTTCG CTCGCGGCAC AAGCTCAACG TGGTCGGCCT GCGCCGCCAG
GGCCAGGCGC TGGAAGGCGT GCTGGTGGAC GAAAAGCTCA AGGCCTCCGA CACCCTGCTG
GTGGCCGGCG CCTGGCGCGA CATTCACCGC CTGCAGGGGC TGAGCCGCGA TTTTCTGGTG
CTCAGCCTGC CGGCGGAGGT GGCCGAGGTG GCACCGGCCG CGCGCAAGGC GCCCTACGCC
CTGCTCAGCC TGGCGGTGAT GGTGGGGCTG ATGGTCAGCG GCCTGGTGCC CAACGTGCAG
GCCGCGCTGA TCGCCTGCCT GCTGCTGGGC GCGTTTCGCT GCATCGACCT GGACAGCGCC
TACCGCGCCA TCCACTGGCC GACGCTGATC CTTATCGTCG GCATGCTGCC CTTCGCCCAG
GCGCTGCAGC AGACCGGTGG CGTCGAGCTG GCCGTGCTGG GGCTGGTAGG TGGCCTGGGC
GATGCCGGGC CACGCTTGAT ACTCGCCAGC CTGTTCGCCC TCACCGCGGT GATCGGCCTG
TTCATCTCCA ACACCGCCAC CGCCGTGCTG ATGGCCCCGG TGGCCATCGC CACGGCGCAG
GCGCTGGGCG CCTCGCCGCT GCCCTTCGCC ATGACCGTGG CCCTGGCGGC GTCGGCCGCC
TTCATGACGC CGATCTCCTC GCCGGTGAAC ACCCTGGTGC TCGGCCCCGG GCAATACCGC
TTCGGCGACT TCGTGCGCAT CGGCGTGCCC TTCACCCTGC TGGTGATGCT GGTCAGCGTG
CTGCTGGTGC CGCTGATTTT TCCGCTCTGA
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| Protein sequence | MNPDLLWVLA LLAGAVTLFV IGRPRMDVVA LLVLVALPLT GVLDLQQTLA GFSDANVILI
AALFVIGDGL VRTGIAYRLG DWLVAKAGSS ETRLLILLML AVAGLGSVMS STGVVAIFIP
VVLGVAARLR IAPARLMMPL AFAGLISGML TLVATPPNLV VHAELRRAGL DGFGFFDFTP
IGLAVLVLGI GYMLLARRWL VRKGAGDAAE PPRLTLADLA ERYRLGERER RLQVRADSPL
ANQVLNELAL RRDHGINVIA IERRQRLRTL LLMASGNTLL EPGDVLLVDI ASPTIGLLGS
YQALGLEPMP LPHSYFSLHA HELGLAEVAL PPESQLPGKT IQELGFRSRH KLNVVGLRRQ
GQALEGVLVD EKLKASDTLL VAGAWRDIHR LQGLSRDFLV LSLPAEVAEV APAARKAPYA
LLSLAVMVGL MVSGLVPNVQ AALIACLLLG AFRCIDLDSA YRAIHWPTLI LIVGMLPFAQ
ALQQTGGVEL AVLGLVGGLG DAGPRLILAS LFALTAVIGL FISNTATAVL MAPVAIATAQ
ALGASPLPFA MTVALAASAA FMTPISSPVN TLVLGPGQYR FGDFVRIGVP FTLLVMLVSV
LLVPLIFPL
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