Gene Pmen_3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3508 
SymbolhscB 
ID5105976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3869326 
End bp3869847 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content64% 
IMG OID640504760 
Productco-chaperone HscB 
Protein accessionYP_001188988 
Protein GI146308523 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID[TIGR00714] Fe-S protein assembly co-chaperone HscB 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.935785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTAATC CTTGCCATTT CGCCCTGTTC GATCTGCAGC CGAGTTTTCG TCTCGACCTC 
GAGCAGTTGG CCGCACGCTA TCGCGAGCTG GCGCGCCAGG TTCATCCGGA TCGCTTCGCC
GATGCCGGTG AGCGCGAGCA GCGTCTGGCG CTGGAGCGCT CGGCCTGTCT CAACGAGGCT
TATCAGGTCC TGAAGACGCC GTCGCAGCGA GCGCGTTACC TGCTGGCCCT GCGGGGGCCG
GAGCTGCCGC TGGAAGTGAC GGTGCAGGAT CCGGATTTTC TGCTGCAGCA GATGCAGCTG
CGCGAGGAGC TGGAAGAACT GCAGGATGAC GCCGATCTCG CCGGCGTCGC GGCCTTCAAG
CGGCGCCTGA AAACCGCACA AGAGCAGCTC AATGACAGTT TCGCCGCGTG CTGGGACGAC
GATACCCGGC GCGAGGAGGC CGAGCGCCTG ATGCGTCGCA TGCAGTTCCT CGACAAGCTG
TCCCATGAAG TGCGCCAGTT AGAAGAGCGC CTCGACGATT AA
 
Protein sequence
MGNPCHFALF DLQPSFRLDL EQLAARYREL ARQVHPDRFA DAGEREQRLA LERSACLNEA 
YQVLKTPSQR ARYLLALRGP ELPLEVTVQD PDFLLQQMQL REELEELQDD ADLAGVAAFK
RRLKTAQEQL NDSFAACWDD DTRREEAERL MRRMQFLDKL SHEVRQLEER LDD