Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3508 |
Symbol | hscB |
ID | 5105976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3869326 |
End bp | 3869847 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640504760 |
Product | co-chaperone HscB |
Protein accession | YP_001188988 |
Protein GI | 146308523 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
TIGRFAM ID | [TIGR00714] Fe-S protein assembly co-chaperone HscB |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.935785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTAATC CTTGCCATTT CGCCCTGTTC GATCTGCAGC CGAGTTTTCG TCTCGACCTC GAGCAGTTGG CCGCACGCTA TCGCGAGCTG GCGCGCCAGG TTCATCCGGA TCGCTTCGCC GATGCCGGTG AGCGCGAGCA GCGTCTGGCG CTGGAGCGCT CGGCCTGTCT CAACGAGGCT TATCAGGTCC TGAAGACGCC GTCGCAGCGA GCGCGTTACC TGCTGGCCCT GCGGGGGCCG GAGCTGCCGC TGGAAGTGAC GGTGCAGGAT CCGGATTTTC TGCTGCAGCA GATGCAGCTG CGCGAGGAGC TGGAAGAACT GCAGGATGAC GCCGATCTCG CCGGCGTCGC GGCCTTCAAG CGGCGCCTGA AAACCGCACA AGAGCAGCTC AATGACAGTT TCGCCGCGTG CTGGGACGAC GATACCCGGC GCGAGGAGGC CGAGCGCCTG ATGCGTCGCA TGCAGTTCCT CGACAAGCTG TCCCATGAAG TGCGCCAGTT AGAAGAGCGC CTCGACGATT AA
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Protein sequence | MGNPCHFALF DLQPSFRLDL EQLAARYREL ARQVHPDRFA DAGEREQRLA LERSACLNEA YQVLKTPSQR ARYLLALRGP ELPLEVTVQD PDFLLQQMQL REELEELQDD ADLAGVAAFK RRLKTAQEQL NDSFAACWDD DTRREEAERL MRRMQFLDKL SHEVRQLEER LDD
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