| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3385 |
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| Symbol | |
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| ID | 5105857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3737175 |
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| End bp | 3737726 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504641 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001188869 |
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| Protein GI | 146308404 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.861601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCGAG GTCGGCTGGC GGAGCTGCAG CCGCTGGCGC TGATCGCCGG CGGCATGCTG
CTGGTGCAGC TGGTCAATGG CATCTTCGCT GGTGCCCTCA ACGTCTGGGG CCTGGTGCCC
CGGCACGTCG AGGCGCTGCC CGGCATTCTC CTCGCGCCCT GGCTGCATGG CAGCTGGGCG
CATCTGCTGA GCAATCTCAG TGGCCTGCTG GTGCTTGGCA GCCTGTTGCT GCTGCGCTCG
CGCCGCGACT TCTGGTTCGC CAGCGCCTTC ATCATCCTCG GCAGCGGGGC GCTGGTCTGG
CTGTTCGGCC GCACCGGCCT GCATATCGGC GCCAGCGGCT GGCTGTTCGG CTTCTGGGGG
CTGCTCCTGG CGCGCGCCTG GTTCGAGCGC AGCCTGCTCG ACCTGCTGCT GGCCGCGCTG
GTGTTCTTCC TCTACGGCGG CTGGTTCTTC GGCCTGCTGC CGCGTGCCGG CGTTTCCTTC
GAATACCACT TGGCGGGAGC TTTCTGCGGT GTGCTGTACG CTGCGCTGAC TCGTCGCCGC
ATTCAACGAT AA
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| Protein sequence | MRRGRLAELQ PLALIAGGML LVQLVNGIFA GALNVWGLVP RHVEALPGIL LAPWLHGSWA
HLLSNLSGLL VLGSLLLLRS RRDFWFASAF IILGSGALVW LFGRTGLHIG ASGWLFGFWG
LLLARAWFER SLLDLLLAAL VFFLYGGWFF GLLPRAGVSF EYHLAGAFCG VLYAALTRRR
IQR
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