Gene Pmen_3328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3328 
Symbol 
ID5105801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3672913 
End bp3673482 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content66% 
IMG OID640504585 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001188813 
Protein GI146308348 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.365635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAC CGCAATTGGT CACGCTGCAG CGAGGAGCCT TGCGCCTGGA GCCACTGGCC 
GATGCCGATA TCCCGGCCCT GGTCGCGCTG GCCGAGGCCA ATCGTGACGA GCTGCTGTAC
ATGAGCGGTA CCCAGCGTCT GGACTGGTAT CGCAGCGCAC TGGCCGAACT GCGCGAGCAA
CGCGCGCTGC CATTCGCCAT CCGTCTCGGC GAGCAGCTGG TCGGCACCAC TCGCTTCGGC
GATTTCATGA ACAGCCTGCC GGCCTGCGAG ATCGGCTGGA CCTGGCTCGA TCGCGCCCAG
CATGGCAGCG GGCTGAACGC CAGCATCAAG TACCTGATGC TCAAGCATGC CTTCGACAAC
TGGGGCATGG TCCGTGTGCA GCTGAAAACC GCCGCCAGCA ACCTGCGCTC GCAACGCGCC
ATCGAGAAGC TGGGCGCCGC CCGCGAGGGC CTGCTGCGTA ACCATCGCCG CCTGGCCGAC
GGCCGTCTCG ACGACACGGT GCTGTACAGC ATCACCGATC AGGAATGGCC GCAGGTGCGC
GCCGTCCTGG AAGCGCGCTT CGGCGGCTGA
 
Protein sequence
MFKPQLVTLQ RGALRLEPLA DADIPALVAL AEANRDELLY MSGTQRLDWY RSALAELREQ 
RALPFAIRLG EQLVGTTRFG DFMNSLPACE IGWTWLDRAQ HGSGLNASIK YLMLKHAFDN
WGMVRVQLKT AASNLRSQRA IEKLGAAREG LLRNHRRLAD GRLDDTVLYS ITDQEWPQVR
AVLEARFGG