Gene Pmen_3322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3322 
Symbol 
ID5105795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3665897 
End bp3666478 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content63% 
IMG OID640504579 
Productsuperoxide dismutase 
Protein accessionYP_001188807 
Protein GI146308342 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCG AACTGCCGCC GCTGCCTTAC GAAAAGAACG CCCTCGAGCC GCACATTTCC 
GCCGAGACCC TGGAATACCA CCACGACAAG CACCACAACA CCTACGTGGT GAACCTGAAC
AACCTGGTGC CGGGCACCGA GTTCGAAGGC AAGAGCCTGG AAGAAATCGT CAAGACTTCC
TCGGGCGGCA TCTTCAACAA CGCCGCTCAG GTGTGGAACC ACACCTTCTA CTGGAACTGC
CTGTCGCCCA ACGGCGGTGG CCAGCCCACC GGCGCCCTGG CTGACGCCAT CAACGCAGCC
TTCGGCTCCT TCGACAAGTT CAAGGAAGAG TTCAGCAAGG TCTCCATCGG CACCTTCGGC
TCCGGCTGGG GCTGGCTGGT GAAGAAGGCC GACGGCTCCC TGGCCCTGGC CAGCACCATC
GGTGCCGGCT GCCCGCTGAC CTCCGGCGAC ACCCCGCTGC TGACCTGCGA CGTCTGGGAA
CACGCCTACT ACATCGACTA CCGCAACCTG CGTCCGAAGT ACGTCGAGGC GTTCTGGAAC
CTGGTCAACT GGGACTTCGT CGCCCAGAAC TACGCCGCCT GA
 
Protein sequence
MAFELPPLPY EKNALEPHIS AETLEYHHDK HHNTYVVNLN NLVPGTEFEG KSLEEIVKTS 
SGGIFNNAAQ VWNHTFYWNC LSPNGGGQPT GALADAINAA FGSFDKFKEE FSKVSIGTFG
SGWGWLVKKA DGSLALASTI GAGCPLTSGD TPLLTCDVWE HAYYIDYRNL RPKYVEAFWN
LVNWDFVAQN YAA