Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3322 |
Symbol | |
ID | 5105795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3665897 |
End bp | 3666478 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640504579 |
Product | superoxide dismutase |
Protein accession | YP_001188807 |
Protein GI | 146308342 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTCG AACTGCCGCC GCTGCCTTAC GAAAAGAACG CCCTCGAGCC GCACATTTCC GCCGAGACCC TGGAATACCA CCACGACAAG CACCACAACA CCTACGTGGT GAACCTGAAC AACCTGGTGC CGGGCACCGA GTTCGAAGGC AAGAGCCTGG AAGAAATCGT CAAGACTTCC TCGGGCGGCA TCTTCAACAA CGCCGCTCAG GTGTGGAACC ACACCTTCTA CTGGAACTGC CTGTCGCCCA ACGGCGGTGG CCAGCCCACC GGCGCCCTGG CTGACGCCAT CAACGCAGCC TTCGGCTCCT TCGACAAGTT CAAGGAAGAG TTCAGCAAGG TCTCCATCGG CACCTTCGGC TCCGGCTGGG GCTGGCTGGT GAAGAAGGCC GACGGCTCCC TGGCCCTGGC CAGCACCATC GGTGCCGGCT GCCCGCTGAC CTCCGGCGAC ACCCCGCTGC TGACCTGCGA CGTCTGGGAA CACGCCTACT ACATCGACTA CCGCAACCTG CGTCCGAAGT ACGTCGAGGC GTTCTGGAAC CTGGTCAACT GGGACTTCGT CGCCCAGAAC TACGCCGCCT GA
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Protein sequence | MAFELPPLPY EKNALEPHIS AETLEYHHDK HHNTYVVNLN NLVPGTEFEG KSLEEIVKTS SGGIFNNAAQ VWNHTFYWNC LSPNGGGQPT GALADAINAA FGSFDKFKEE FSKVSIGTFG SGWGWLVKKA DGSLALASTI GAGCPLTSGD TPLLTCDVWE HAYYIDYRNL RPKYVEAFWN LVNWDFVAQN YAA
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