Gene Pmen_3262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3262 
Symbol 
ID5106769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3611090 
End bp3611863 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID640504519 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001188747 
Protein GI146308282 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT ACCTGCATAT CGAACGCGAC GGCGGTCTGC TGACCCTGCG CATGCAACGA 
CCTGACAAGA AGAACGCGCT GACCCGCGCC ATGTACGCCG GTATGGCCGA GGTGCTGGAC
CAGGCGGCTC AGGACCCGAG CGTACGCGTC GTCCTGCTGA CCGGCAGCGA GCAATGCTTT
ACCAGCGGCA ACGACGTCGC CGACTTCCTC CAGGCGCCGC CGACCGGTCT GAACAGCGAA
GTGTTCCAGT TCATGCGCGC GCTGTTCGAG TTCCCCAAAC CCGTGGTGGC GGCGGTGGCC
GGCCCGGCCG TGGGTATCGG CACCACGCTG CTGCTGCATT GCGATCTGGT CTACGTCAGC
CGTGATGCGC AGCTGAAGAT GCCGTTCGTC AACCTCGGCT TGTGCCCGGA GTACGGCTCC
AGCCTGATCC TGCCGCGTCT GCTGGGGCAC GCGCGAGCCG CTGAGTTGCT GTTGCTCGGC
CAGGCGTTCA GCGGCGAACA GGCGGCGGCC TGGGGCATCG CCAATCAAGC GCTGGACGAC
GGTGCGGCGA CGCTGGCCAA GGCGCGCGAG ATGGCCAAGC ACTTTCTCGA CCTGGCGCCC
TCGGCAGTGG TCGACAGCAA GCGCCTGATG CGTGCGCCGG GGCGCGAGGA GCTGCGCAAG
GTGATCGAGG AGGAGGGCGC CCTGTTCGGC CAACGCCTGC GCTCGCCGGA GGCCGTCGAG
GCACTGACGG CATTCATGCA GCGCAGAAAG CCGGATTTCT CCAGATTCGC GTAG
 
Protein sequence
MSEYLHIERD GGLLTLRMQR PDKKNALTRA MYAGMAEVLD QAAQDPSVRV VLLTGSEQCF 
TSGNDVADFL QAPPTGLNSE VFQFMRALFE FPKPVVAAVA GPAVGIGTTL LLHCDLVYVS
RDAQLKMPFV NLGLCPEYGS SLILPRLLGH ARAAELLLLG QAFSGEQAAA WGIANQALDD
GAATLAKARE MAKHFLDLAP SAVVDSKRLM RAPGREELRK VIEEEGALFG QRLRSPEAVE
ALTAFMQRRK PDFSRFA