Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3245 |
Symbol | |
ID | 5106752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3595877 |
End bp | 3596983 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640504502 |
Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
Protein accession | YP_001188730 |
Protein GI | 146308265 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATATT TCAAACTGCC CGATCTGGGC GAGGGCCTGC AGGAAGCCGA GATCGTCGAG TGGCACGTCA AGGCCGGCGA CACGGTCAAG GCCGACCAGT TGCTGGTGTC GGTGGAAACC GCCAAGGCCA TAGTCGACAT TCCCGCGCCC TATGACGGGG TGCTGGTGAA GACCTTCGGC AAGGAAGGCG ACATTCTGCA TGTCGGCGAA CCGCTGGCCG CCTACGAGGG CGAAGCCGAC GCCGGCACCG TGGTCGGGCG CCTGGAGGGT GGTGGCGAGG CTGGCGCGGA CAATTTCTTC GTCGGCGCTG CGCCGAGCAC CCGCGAACAC CTGGCGCCGC GGGCGACGCC GGCGGTACGG CAGCTGGCGC GTCAGCTCGG CGTCGACCTG GCTGCCGTGC AGGGCAGTGG CGCCGACGGC CTGATCACCC GCGCCGATGT CGAGGGCGCC AGCCAGGGCG AGCGCGAGCG CTTCGGCGGC GAGAAATTGC GCGGCGTACG CCGCAGCATG GCGCTGAACA TGTCCCGCGC GCATGCCGAG GTGGTGCCGG TGGTGATAGT CGGCGACGCC GATCTGCACC GCTGGCGCGA GGCGCGCGAC CCGCTGGTAC GCATCGCCCA GGCCATCGCC GTGGCCTGCG AGGCGGAGCC GGTGCTCAAC AGCTGGTTCG ATGGCAAGAA CCTGTCGATC AAGCGCCATG CCCAGCTCGA TCTGGGCATC GCCGTGGATA CGCCGGACGG CCTGTTCGTG CCCGTGCTGC GCAACGTCGG CGCGCGCAGC GCCGAGGATC TGAAAGAGGG CGTGGCACGC CTGCGCGCCG ACGTGCGCGC ACGTTCCATC CCGCCGCAGG AGATGATGGG CGCGACCCTG ACCCTGTCCA ACTTCGGCAC CCTGTTCGGC CGCTACGCCA ACCCGGTGGT GGTGCCGCCG CAGGTGGCGA TCATCGGCGC CGGCGGCATC CGCGACGAGC CGGTGGCGGT CGATGGCCAG GTGGTGGTGC ACCCGATCCT GCCGCTGTCG CTGACCTTCG ACCACCGCGC CGTCACCGGC GGCGAGGCCG CGCGCTTTCT CAAGGCGCTG GTCGAGGCGC TGCAGCAGCC GGAGTGA
|
Protein sequence | MKYFKLPDLG EGLQEAEIVE WHVKAGDTVK ADQLLVSVET AKAIVDIPAP YDGVLVKTFG KEGDILHVGE PLAAYEGEAD AGTVVGRLEG GGEAGADNFF VGAAPSTREH LAPRATPAVR QLARQLGVDL AAVQGSGADG LITRADVEGA SQGERERFGG EKLRGVRRSM ALNMSRAHAE VVPVVIVGDA DLHRWREARD PLVRIAQAIA VACEAEPVLN SWFDGKNLSI KRHAQLDLGI AVDTPDGLFV PVLRNVGARS AEDLKEGVAR LRADVRARSI PPQEMMGATL TLSNFGTLFG RYANPVVVPP QVAIIGAGGI RDEPVAVDGQ VVVHPILPLS LTFDHRAVTG GEAARFLKAL VEALQQPE
|
| |