Gene Pmen_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3234 
Symbol 
ID5106741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3581261 
End bp3581794 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content65% 
IMG OID640504491 
Productcytochrome B561 
Protein accessionYP_001188719 
Protein GI146308254 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.730011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAC TGCATGATTG CGCGCAGCGC TACGGCAGCG TGAGCCGTGC GCTGCACTGG 
AGCATGGCGG TATTGCTCGC TTGGCAATTC GTCACCGTCA TCGTTCATGT GCTGCTGGAA
GACAGCGCCC TGGACAAGTT CGCCTGGGGC ACGCACAAGG CCACCGGCCT GCTGCTGATG
GTGCTGGTGG TCATCCGCCT GTGCTGGGCG CTGTACAGCC GCAACCGTCG GCCGGCGTCG
GTCAGCACCC TGGCGCGGCT CGGCCACCTG ACGCTGTACG GCCTGCTGTT CGTGATTCCC
TTTATCGCCC TGCTGCGCCA GTACGGTTCC GGCCGGGAGT TCGTCGCCTT CGGCATGACC
GTCATGCCCG GTTTCAGTGA TCCCAAGATC GACTGGATGA TCGCCCCGGC CAGCCTGCTG
CACGGCAACC TCGGCTGGTT GCTGCTGCTT CTGGTGATCG GCCACGTGGC CATGGCCCTG
TTCCACCGCC GCCAGGGTGG CGAGGATGTG CTGGCGCGGA TGATAGGTCG CTGA
 
Protein sequence
MSQLHDCAQR YGSVSRALHW SMAVLLAWQF VTVIVHVLLE DSALDKFAWG THKATGLLLM 
VLVVIRLCWA LYSRNRRPAS VSTLARLGHL TLYGLLFVIP FIALLRQYGS GREFVAFGMT
VMPGFSDPKI DWMIAPASLL HGNLGWLLLL LVIGHVAMAL FHRRQGGEDV LARMIGR