Gene Pmen_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3212 
Symbol 
ID5106541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3552363 
End bp3552797 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content59% 
IMG OID640504469 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_001188697 
Protein GI146308232 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.502813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCA CAGGCCAGTG TCGATGCGGA AAAGTCCGCA TCAGTTTGCG TGCCGAAGTT 
CGACCACCGC TGTATGCCTG CCACTGTCTC AATTGTCAGC AATGGAGTGG CAGTGCATTC
GGTTTGCATC TGCTGTGCGC CGCGCAGGCG GTAGAGGTCT CTGGCCCTGT CCGCGAATAT
CGCTATGAAC ATCACGGGCA CGTCTCGACT CAGTACGCTT GCGAAGTCTG CTTTACTCGG
CTGTTTAACG AGACGACCGC TGCAGAGGGC ATGCGCATAG TCCGAGCTGG TGTGCTGGAG
GGAGCGGTGC AGTGGACCCC GCAAGCTCAT ATCTGGACCA AGCGCCGGCA GTCCTGGATC
ACTCTGCCAG CGGGCGTAGC CCAATGGCCG GAGAGCCCGA CGCCGGAAGA GTTTGCGACT
GCGCTGTTCG AATAA
 
Protein sequence
MEFTGQCRCG KVRISLRAEV RPPLYACHCL NCQQWSGSAF GLHLLCAAQA VEVSGPVREY 
RYEHHGHVST QYACEVCFTR LFNETTAAEG MRIVRAGVLE GAVQWTPQAH IWTKRRQSWI
TLPAGVAQWP ESPTPEEFAT ALFE