| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3190 |
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| Symbol | |
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| ID | 5106519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3526003 |
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| End bp | 3526683 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504447 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001188675 |
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| Protein GI | 146308210 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0211783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGTG CGCAGGTGCT GCATGTCGGC TTCGGCACGC ACAAGCCACC TTACGTGTTC
GAGGGCGAGC CGCGTGGTCT GGAGTACGAG CTGGTGGACG GCGCGGCGCG CAATGCCGGT
TTCGTGGTGA CCGCCTACTA CGCGCCGATG GAACGCCTGC ACCTGATGCT GCGGCGCGGC
GAGATCGATG CCATCACCAC CACCCATGAG CGCAGTGGGG TAGAGGCGTT CTACTCGGAC
GTCTACATCC ACTACCACAA CGCGGCGGTG GCCCTGGCCA GGCGCGGCTA CCGTATCGAA
CGCATCGCCG ATCTCGGTCG GCATTCCGTG AGCGCCTTCC AGCGCGCCCG GGTTCTGCTC
GGGCCGGAGT TCGAACGCAT GGCCATGAAC AACCCGCGTT ATCGCGAAGA GGCGCTGCAG
ATCAATCGCA ACCGCCTGCT GTACAGCGGG CGTATCGAGG TGGTGGTGGG GGACAAGCGG
ATCATTCGCT ACTTCAACCG TGAGGTCGCC GATCAGGTCG ACGTCAACCA GCCGCTGACC
TGGTTCGAAC TGTTCCCGCC TACGCCGTAT CGGGTCGGCT TCCGGCGCCA GGAGCAGCGC
CAGCGCTTCG ACGAGGGCCT GCGCAGGCTC AGGGAGAGCG GTGAGTATCA GCGTATCGAG
CAGCGCTACC TGGCGGACTG A
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| Protein sequence | MASAQVLHVG FGTHKPPYVF EGEPRGLEYE LVDGAARNAG FVVTAYYAPM ERLHLMLRRG
EIDAITTTHE RSGVEAFYSD VYIHYHNAAV ALARRGYRIE RIADLGRHSV SAFQRARVLL
GPEFERMAMN NPRYREEALQ INRNRLLYSG RIEVVVGDKR IIRYFNREVA DQVDVNQPLT
WFELFPPTPY RVGFRRQEQR QRFDEGLRRL RESGEYQRIE QRYLAD
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