| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3187 |
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| Symbol | |
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| ID | 5107283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3523400 |
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| End bp | 3524242 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640504444 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001188672 |
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| Protein GI | 146308207 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2996] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.547241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0826379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTTA TCGGGCGGAT GAATTCTTTG CAGGTGGTCA AGCACACCGA CTTCGGTCTG
TACCTGGACG GTGGCGCGGA TGGCGAAATC CTCCTGCCCA AGCGCTACAT CCCCAAGGAC
ACGCCGAGCG AGGTCGATGA CTGGCTCAAC GTGTTCATCT ACCTCGACAG TGAAGACAAG
CTGATCGCCA CCACCCTGAA ACCGAAGATC CAGCTCGGCG AGTTCGCCAG CCTCAAGGTG
GTGGATATCA ACCGCGTCGG CCTGTTCTTC GACTGGGGCC TGCCCAAGGA CCTGCTGCTG
CCGCATTCCG AAGAGAAGCG CCCTCTGCAG ATCGGCGACT ATTGCGTGAT CTACCTCTAT
CTGGACAAGC GCACCCGCCG CCTTACCGCC ACCGCGCGCC TGGATCGCCA CCTGGACAAG
GTGCCGGCCA ATTATCAGGT CGGCCAGGAA GTCGATCTGC TGGTGGTCGA GCGGACCGAC
CTGGGCTTCA AGGCCATCAT CGACGGCAAG CACTGGGGCC TGATTCACAA GAACGAACTG
TTCAAGTTCA TCCGCAGCGG CATGCGCGAG AAGGGCTACA TCAAGGAGCT GCGCGCCGAC
GGCAAGATCA GCCTGAGCCT GCAGCCCATC GGCCGCGAAG CTGCCAGCGG CCTGGCCGAG
CAGATCATCG AACGCCTGCG CGCGCAGGGC GGCGTACTGG CATTGGGCGA CAAGAGCCCG
CCAGAGGCGA TCGCCGAGCA GTTCCGGGTC AGCAAGGGCA ACTTCAAGAA GGCCATCGGC
GGCCTCTACA AGCAGGGCCT GATCCACATT CACGACGACC GTATCGAACT GCTCGACAAC
TGA
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| Protein sequence | MAVIGRMNSL QVVKHTDFGL YLDGGADGEI LLPKRYIPKD TPSEVDDWLN VFIYLDSEDK
LIATTLKPKI QLGEFASLKV VDINRVGLFF DWGLPKDLLL PHSEEKRPLQ IGDYCVIYLY
LDKRTRRLTA TARLDRHLDK VPANYQVGQE VDLLVVERTD LGFKAIIDGK HWGLIHKNEL
FKFIRSGMRE KGYIKELRAD GKISLSLQPI GREAASGLAE QIIERLRAQG GVLALGDKSP
PEAIAEQFRV SKGNFKKAIG GLYKQGLIHI HDDRIELLDN
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