Gene Pmen_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3170 
Symbol 
ID5106499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3509407 
End bp3509772 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content63% 
IMG OID640504426 
Producthypothetical protein 
Protein accessionYP_001188655 
Protein GI146308190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.108362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGG TAACCCGCAG CGGCGATCAG CGCATCGACG TGGATTTCAC CGGCAAGCTG 
GACAGCGAGG CCATGCGTGT CGCCCTCGAC GAATTGATTC AGGCCGCCGA AGGCATAGAG
CACGGCAAGA TGTTCTATCG CGTCGGCAGT TTCGAGTGGC CAACGCTCGG TGCGGTGGGC
GTCGAGCTCA AGCGCATTCC GCAGCTGCTG CGCCTGATTC GCCAGTTCGA CCGGGTGGCG
GTGGTAGCCG ATCAGCAGTG GCTGCGCACC GCCAGCGAGG TGGAGGGGGC ATTGATTCCG
GGCCTGACCA TCAAGGCCTT CGATTCGATC CACGAAGCGC AGGCCGAAGC CTGGTTGCAG
CAATGA
 
Protein sequence
MFKVTRSGDQ RIDVDFTGKL DSEAMRVALD ELIQAAEGIE HGKMFYRVGS FEWPTLGAVG 
VELKRIPQLL RLIRQFDRVA VVADQQWLRT ASEVEGALIP GLTIKAFDSI HEAQAEAWLQ
Q