| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3116 |
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| Symbol | |
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| ID | 5107438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3443157 |
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| End bp | 3444317 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640504372 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001188601 |
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| Protein GI | 146308136 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.255737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.184404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCCGA GCAACAGGCG CAATCCGGTC CTGCTGAGCC TGGCCCTGCT ACTGCTGGCC
GGGCTGTGGC TCGGCGATTT CGCCGGCCTG GCGGCCAACC GCATCGTGCC CGGCCAGGGC
CACGGCCTGA GCGACGCGCT CGGCCTGCCC TGGGCGCTAT CGCTGAGCGC CGCGTTGCTG
GCCCTGGCGG CCCTGGCCTG GCGTGCCGAG CCGCATCATC TGCGTCTGGC GCAGGGCCTG
TTGGCGCTTC TGCTGGCCCA GTTGCCGCTG GCCCTGGCCT GGTTCGCCGC GCGCCACCTC
GACCCGGCTC TGCCGCAGGC GCGCATCGCG CCGGGCTTCG GCGTCTGGAG TCAGCTGTTC
GTCTACGGCC TGATGCTGAT CGAGCTGCGC CAGCGTCTGG GTGGACGCCT GTGGCTGATC
GGGCCACTGC TCCTGCTGCT GCTCAGCGCC GTGCTGATCG CCAGCGGTGC CTGGGATTCG
CTGGCGCTGA TGCGCGAGTA CGCCGGCCGC AGCCGCCAGT TCTGGCAGGC TCTGGGCGGG
CACCTGGCGC TGGTCGGCGG CACCCTGGCG CTGAGCCTGG GCCTGGGGTT CGCCCTGGCG
CTGACGATCG GCCGCTGGCC ACGCACCCAG GCGGCCCTGT ACGGGCTGCT CAATCTGCTG
CAGACCATTC CCAGCCTGGC GCTGTTCGGC CTGCTGATCC CTGTGCTGAG CTACCTGGCC
ACGCAATCCG CGGCGCTGCA GGCGCTGGGC GTGCGCGGCA TCGGCTGGGC GCCGGCACTG
CTGGCGCTGG TCGCCTACAG CCTGCTGCCG GTGGTGCGCA ACACCCAGGT GGCGCTGCAG
CAGGTGGACG CCGCGGTGCT CGAAGCCGCG CGCGGCATGG GCATGAGCCG CTACCAGCTG
TTCACCCGGG TGCGCCTGCC GCTGGCCCTG CCGGTGATAA TCGAAGGTGT GCGCATCACC
AGTATTCAGG CCATCGGCCT GGCCGCCGTG GCCGCGCTGG TCGGCGCCCA GGGGTTCGGC
ACCTTCATCT TCCAGGGGCT CGGCCAGGGT GCCATGGACC TGGTGCTGCT CGGCGCGCTG
CCGACCATCG CCCTCGCACT GCTCGCCGAC GCCCTGTTCG GCGCACTGGC CCATGTCCTG
ACACGGAGGC GCCGAGCATG A
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| Protein sequence | MQPSNRRNPV LLSLALLLLA GLWLGDFAGL AANRIVPGQG HGLSDALGLP WALSLSAALL
ALAALAWRAE PHHLRLAQGL LALLLAQLPL ALAWFAARHL DPALPQARIA PGFGVWSQLF
VYGLMLIELR QRLGGRLWLI GPLLLLLLSA VLIASGAWDS LALMREYAGR SRQFWQALGG
HLALVGGTLA LSLGLGFALA LTIGRWPRTQ AALYGLLNLL QTIPSLALFG LLIPVLSYLA
TQSAALQALG VRGIGWAPAL LALVAYSLLP VVRNTQVALQ QVDAAVLEAA RGMGMSRYQL
FTRVRLPLAL PVIIEGVRIT SIQAIGLAAV AALVGAQGFG TFIFQGLGQG AMDLVLLGAL
PTIALALLAD ALFGALAHVL TRRRRA
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