Gene Pmen_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3061 
Symbol 
ID5107541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3388951 
End bp3389379 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content67% 
IMG OID640504318 
ProductFe-S metabolism associated SufE 
Protein accessionYP_001188547 
Protein GI146308082 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.720717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATA ACCTGCCCGG CGCCGCTCAG CAAGCGCTGG AGGCCTTCAA TGCCTGCCCC 
GGCTGGGAAC AGCGCGCACG CCTGCTGATG CAGTGGGGCG AACGCCTGCA ACCGCTGAGC
GACGCCGAAC GCATCGACGA ACACCGCGTG CACGGCTGCG AAAGCCTGGT CTGGCTGGTG
GCAGAGAAAC AGGATGGCAT CTGGCATTTC CGCGCCGGCA GCGAAGCCCG CCTGCTACGC
GGCCTGCTGG CCGTGCTGCT GGCCAGAGTC GATGGGCTCG GCAGCGATGA GCTGGCCAGG
CTCGATCTGG CCGGCTGGTT CGAGCAGTTG GGTCTGCAAC GCCAGCTCTC GCCGTCACGC
AGCAATGGGC TCAATGCGGT GCTGCAGCGC ATGCGAGAGC TGGCTGCGTC CTGCGATGGG
AGCCGCTGA
 
Protein sequence
MTNNLPGAAQ QALEAFNACP GWEQRARLLM QWGERLQPLS DAERIDEHRV HGCESLVWLV 
AEKQDGIWHF RAGSEARLLR GLLAVLLARV DGLGSDELAR LDLAGWFEQL GLQRQLSPSR
SNGLNAVLQR MRELAASCDG SR