| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3060 |
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| Symbol | |
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| ID | 5107540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3387731 |
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| End bp | 3388954 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640504317 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_001188546 |
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| Protein GI | 146308081 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.349128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTGG AAGCATCCAT GTCACTGATT TCCCCCTGGC GCGCCGACTT CCCCGGCATC
CTCGCCCTCG CAGGCGAGGG CCAGACCTAC CTGGACAGCG CCGCCACCGC CCAGAAACCG
CAGGCGGTGC TCGATGCCCT GCTCGGCTAT CTGGCCGGCG GCGCGGCCAA CGTGCATCGC
GCCCAGCACC TGCCGGGCGA ACGCGCCACC CGCGCCTTCG AGGCGACGCG GGACAAGGCG
GCGGCCTGGC TGAATGCCGC CAGCCGCGAT GAGATTCTCT TCACCCGCGG CTCGACCGAA
GCCCTGAACC TGCTGGCCTA CGGCCTGGAG CATCTGCTGC AGCCCGGCGA CGAGATCGTC
GTCAGTGCCC TGGAGCACCA TGCCAATCTG CTGCCCTGGC AGCAGCTGGC CCAGCGTCGC
GGCTTGCAAC TCGTGGTGCT GCCGCTGGAC GATACGGGCG GCATCGACCT GAGCCAGGCC
GCCCAGATGA TCGGCCCGCG CACCCGCCTG CTGGCGGTGT CGCAGCTGTC CAACGTGCTC
GGCTGCTGGC TGCCGCTGGC CGAGCTGCTG GCACTGGCCC GCGCGCAAGG CGCCATCAGC
GTGGTCGACG GCGCCCAGGG TGCGGTGCAT GGCCGCCACG ACATGCAGGC GCTGGGCTGC
GACTTCTACG TCTGCTCGGC GCACAAGCTT TACGGCCCGG ACGGCGTCGG CCTGCTCTAT
GGCCGTGGCG CGGCGCTGGC GCAGCTGCGT CACTGGCAGT TCGGCGGCGA GATGGTGCTG
GACGCCGACT ACCAGAGCGC GCGCTTTCGC CCCGCTCCGC TGGGTTTCGA GGCGGGCACC
CCACCGGTCT CGGCGGTGAT CACCCTGGGC GCGGCGCTGG ACTGGCTGAA CGGCCTCGAT
CAGGCCGCCG TGGCGCGGCA TGAAGCAGCA CTGCATGCCG AGCTGCTGGC CGGCCTGGCG
GCGCGCGACG GCGTGCGCCT GCTCGGCGCG CCGCAGCTGG CGCTGGCCAG TTTCTGCGTC
GACGGCGTGC ACAACGCCGA CCTGGCCCAC CTGCTGAGCG AACAGGGCAT CGCCGTGCGT
GCCGGTCATC ACTGCGCCAT GCCGCTGATG AAGGGCCTCG GCCTGTCCGG CGCGATCCGC
GTGTCGCTCG GCCTGTACAA CGACGGCGAC GACCTGCAGC GCTTCTTCGC GGCGCTGGAC
AAGGCCCTGG AGCTGCTGCA ATGA
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| Protein sequence | MTLEASMSLI SPWRADFPGI LALAGEGQTY LDSAATAQKP QAVLDALLGY LAGGAANVHR
AQHLPGERAT RAFEATRDKA AAWLNAASRD EILFTRGSTE ALNLLAYGLE HLLQPGDEIV
VSALEHHANL LPWQQLAQRR GLQLVVLPLD DTGGIDLSQA AQMIGPRTRL LAVSQLSNVL
GCWLPLAELL ALARAQGAIS VVDGAQGAVH GRHDMQALGC DFYVCSAHKL YGPDGVGLLY
GRGAALAQLR HWQFGGEMVL DADYQSARFR PAPLGFEAGT PPVSAVITLG AALDWLNGLD
QAAVARHEAA LHAELLAGLA ARDGVRLLGA PQLALASFCV DGVHNADLAH LLSEQGIAVR
AGHHCAMPLM KGLGLSGAIR VSLGLYNDGD DLQRFFAALD KALELLQ
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