Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2977 |
Symbol | |
ID | 5107695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3302403 |
End bp | 3303008 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640504235 |
Product | hypothetical protein |
Protein accession | YP_001188464 |
Protein GI | 146307999 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.128121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA CCCTGAACCG TATCGCATTC GCCACCTGCC TGGCCCTGGG CACCACCGCT GCGCAGGCCA ACGACACCTT CATCGGCCTG ACCTGGGGCC AGACCGACAA CAACATTCAG AAGTCCAGCG CGCTGAACGC CAACCTGGGC AATCCCAAGC TGGACAAGGT CATCGACGAC AAGAGCACCT GGGGTGTACG CGTCGGCCAG AAGACCGCCG ATGGCCGTTA CTACGCCACC TACGAAAACG TCTCCGACAG CCATAACGGT TACAAGCTGC GCCAGCAGAA CCTGCTCGGC AGCTATGACA TGTTCGTCCC GCTGGGCGAC AACAACACCA AGCTGTTCGG CGGCGTGACC GCTGGCCTGG TCAAGCTGGA GCAGGAAAGC AGCGGCTTCT CCCGTGACAG CGATATCGGT TTTGCCGCCG GTTTGCAGGC CGGTATCCTG CAGGAACTGA ACAACAATGC TTCGATCGAA GCCGGCTATC GTTACTTGCG TACGAATGCC AGCACTGAAA TGGCGCCGCA TGGGCAGCCC AAGGCCGGGT CGCTGGATCT GCACAGCAGT TCGCAGCTCT ACCTCGGTGC CAACTTTGCC TTCTGA
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Protein sequence | MKTTLNRIAF ATCLALGTTA AQANDTFIGL TWGQTDNNIQ KSSALNANLG NPKLDKVIDD KSTWGVRVGQ KTADGRYYAT YENVSDSHNG YKLRQQNLLG SYDMFVPLGD NNTKLFGGVT AGLVKLEQES SGFSRDSDIG FAAGLQAGIL QELNNNASIE AGYRYLRTNA STEMAPHGQP KAGSLDLHSS SQLYLGANFA F
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