Gene Pmen_2964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2964 
Symbol 
ID5107682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3289882 
End bp3290481 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content60% 
IMG OID640504222 
Producthypothetical protein 
Protein accessionYP_001188451 
Protein GI146307986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.177485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0208011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCACC ACGTTTGGGG GCTCTTCACC CATCCCGACC AAGAATGGCA AGAAATCCGT 
GGCGAGGAAG AAACCATCAG CCACATGTAC CTGACCCATG TGCTGATTCT CGCGGCTATC
CCCGCCGTTT CGGCCTATAT CGGCACGACC CAGGTTGGTT GGGCCATCGG TGACCGAGCA
CCCGTGATGC TTACCGAAGG CAGTGCGATG GTGATGACCA TCATGTCCTA TCTGGCGATG
CTCGCCGGTG TGGCGGTGAT GGGCGCCTTC ATCCACTGGA TGGCGCGCAC CTATGACGCC
AATCCCACCT TCACCCAGTG CGTCGTGTTC GCAGCCTATA CCGCTACCCC GCTGTTCATC
GGCGGCCTGG CAGCCCTCTA CCCGCACTTG TGGCTGGGCA TGGTGGTCGG CACGGTAGCC
ATCTGCTACA CGGTTTACCT GCTTTACGTC GGCATACCGA CTTTCATGAA CATTCCCGAG
GACGAAGGGT TCATGTTCTC CAGCTCGGTG CTGGCGGTAG GCCTGGTGGT GCTGGTGGCG
ATGATCGCCA GCTCGGTGAT TCTCTGGGGG CTTGGCATCG GCCCCGTCTA CACCAGCTGA
 
Protein sequence
MIHHVWGLFT HPDQEWQEIR GEEETISHMY LTHVLILAAI PAVSAYIGTT QVGWAIGDRA 
PVMLTEGSAM VMTIMSYLAM LAGVAVMGAF IHWMARTYDA NPTFTQCVVF AAYTATPLFI
GGLAALYPHL WLGMVVGTVA ICYTVYLLYV GIPTFMNIPE DEGFMFSSSV LAVGLVVLVA
MIASSVILWG LGIGPVYTS