Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2964 |
Symbol | |
ID | 5107682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3289882 |
End bp | 3290481 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640504222 |
Product | hypothetical protein |
Protein accession | YP_001188451 |
Protein GI | 146307986 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.177485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0208011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCACC ACGTTTGGGG GCTCTTCACC CATCCCGACC AAGAATGGCA AGAAATCCGT GGCGAGGAAG AAACCATCAG CCACATGTAC CTGACCCATG TGCTGATTCT CGCGGCTATC CCCGCCGTTT CGGCCTATAT CGGCACGACC CAGGTTGGTT GGGCCATCGG TGACCGAGCA CCCGTGATGC TTACCGAAGG CAGTGCGATG GTGATGACCA TCATGTCCTA TCTGGCGATG CTCGCCGGTG TGGCGGTGAT GGGCGCCTTC ATCCACTGGA TGGCGCGCAC CTATGACGCC AATCCCACCT TCACCCAGTG CGTCGTGTTC GCAGCCTATA CCGCTACCCC GCTGTTCATC GGCGGCCTGG CAGCCCTCTA CCCGCACTTG TGGCTGGGCA TGGTGGTCGG CACGGTAGCC ATCTGCTACA CGGTTTACCT GCTTTACGTC GGCATACCGA CTTTCATGAA CATTCCCGAG GACGAAGGGT TCATGTTCTC CAGCTCGGTG CTGGCGGTAG GCCTGGTGGT GCTGGTGGCG ATGATCGCCA GCTCGGTGAT TCTCTGGGGG CTTGGCATCG GCCCCGTCTA CACCAGCTGA
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Protein sequence | MIHHVWGLFT HPDQEWQEIR GEEETISHMY LTHVLILAAI PAVSAYIGTT QVGWAIGDRA PVMLTEGSAM VMTIMSYLAM LAGVAVMGAF IHWMARTYDA NPTFTQCVVF AAYTATPLFI GGLAALYPHL WLGMVVGTVA ICYTVYLLYV GIPTFMNIPE DEGFMFSSSV LAVGLVVLVA MIASSVILWG LGIGPVYTS
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