Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2961 |
Symbol | |
ID | 5107679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3286673 |
End bp | 3287737 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640504219 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_001188448 |
Protein GI | 146307983 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.967555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0599843 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCAT CCGTCTCCGC TCAACTCGCT TGCCCCGTTA CCACCATCGC CCGCCGTAGC GCCCAGCCGC TGCCCAGCCC CGCCGTACTG CGCCAGCGCC TGCCATTGCC CGGCGCACTT GCCGAACGCA TCGCCGCTGA CCGCGAGGCT ATCCGCGCCG TGCTCGATGG CCGCGATTCG CGCCTGCTGG TAGTCGTCGG CCCCTGTTCC CTGCATGACC GCACCAGCGC CCTCGAATAC GCCGAACGCC TGGCCGAACT GGCGCCGCAA GTCGATGACC AACTGCTGCT GGTGATGCGC GCCTACGTGG AAAAGCCGCG CACCACCGTG GGCTGGAAGG GCCTGTTGTA CGACCCGCAT CTAAATGGCA GTGGTGATAT GGCCGAAGGG CTGCGTCTGT CGCGGCAACT GATGCTGGAT ATCCTTGAGC GTGGCCTGCC GCTGGCCAGC GAGCTGCTGC AACCCATGGC TGCCGGCTAC TTCGATGATC TGCTCGGTTG GGCGGCGATT GGTGCACGTA CCAGCGAGTC GCAGGTGCAC CGCGAGATGG TCAGCGGTCT GGATCTGCCG GTCGGCTTCA AGAACGGCAC CGACGGCAGC GTCGGCATCG CCTGTGACGC CATGCGTTCG GCTGCGCACC CGCACCAGCA TTTCGGCATC GACGACCTCG GCCATCCGGC GCTGCTGCAA ACCGTCGGCA ACCCGGATAC CCACCTGGTA CTGCGCGGCG GTCATGGCGC GCCGAACCAC GATGCCGCCA GCGTCGCGGC CGCGCGCGAG GCGTTGCAGC GTCAGGGCAT CGCACCGCGG ATCATGGTCG ACTGCAGCCA CGCCAACAGC GGCAAGGACC CGCTGCGCCA GCCAGCGGTG CTGGAGAGCG TGATCGAGCA GCGCCTGGCC GGCGACGCCA GCCTGCGCGG GGTGATGCTG GAGAGCCACC TGTTCGACGG GTGCCAGGCA CTCTCCGGCG AATTGCGCTA TGGCGTGTCG ATCACCGATG GTTGCCTGGG CTGGAGTGGC ACCGAAGCAG CATTGCGTCA GGCCGCCGAG CGTTTGCGCG GGTAG
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Protein sequence | MNASVSAQLA CPVTTIARRS AQPLPSPAVL RQRLPLPGAL AERIAADREA IRAVLDGRDS RLLVVVGPCS LHDRTSALEY AERLAELAPQ VDDQLLLVMR AYVEKPRTTV GWKGLLYDPH LNGSGDMAEG LRLSRQLMLD ILERGLPLAS ELLQPMAAGY FDDLLGWAAI GARTSESQVH REMVSGLDLP VGFKNGTDGS VGIACDAMRS AAHPHQHFGI DDLGHPALLQ TVGNPDTHLV LRGGHGAPNH DAASVAAARE ALQRQGIAPR IMVDCSHANS GKDPLRQPAV LESVIEQRLA GDASLRGVML ESHLFDGCQA LSGELRYGVS ITDGCLGWSG TEAALRQAAE RLRG
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