| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2911 |
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| Symbol | argD |
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| ID | 5107629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3222074 |
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| End bp | 3223294 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504166 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_001188398 |
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| Protein GI | 146307933 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.408245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTTC AGCACGATGC GGTGCAACGC GCCGATTTCG ACCAGTACAT GGTCCCCAAC
TACGCCCCTG CCGCCTTCGT ACCCGTGCGT GGCCTCGGTT CGCGAGTCTG GGATCAGAGT
GGTCGAGAGC TGATCGACTT CGCCGGCGGC ATCGCCGTCA ACGTGCTTGG CCACTGCCAT
CCGGCGCTGG TCGCGGCGCT GACCGAGCAG GCCAACACCC TCTGGCACAT CTCCAACGTG
TTCACCAACG AGCCGACCCT GCGCCTGGGC AAGAAGCTGG TCGATGCGAC CTTCGCCGAG
CGCGTGTTCT TCTGCAACTC TGGCGCCGAG GCCAACGAGG CCGCGTTCAA GCTGGCCCGT
CGTGTTGCGC ATGACCGTTT CGGCCCGGAA AAGCACGAGA TCATTGCCGC GCTCAACAGC
TTCCACGGCC GTACCCTGTT CACCGTCAGC GTCGGCGGCC AGCCGAAGTA CTCCGACGGC
TTCGGTCCGA AGATCCAGGG CATCACCCAC GTGCCCTACA ACGATCTGGA GGCGCTGAAG
GCGGCCATTT CCGACAAGAC CTGCGCAGTG GTACTCGAGC CGATCCAGGG CGAGGGCGGC
GTGCTGCCGG CCGAGAAAGC CTACCTGGAA GGCGCCCGTG AGCTGTGCAA CGCGCACAAC
GCGCTGCTGG TATTCGACGA GGTGCAGAGC GGCATGGGCC GCAGCGGCGA ACTGTTCGCC
TACATGCACT ATGGTGTGGT GCCGGACATT CTCTCCAGCG CCAAGAGCCT GGGGGGTGGC
TTCCCCATCG CCGCCATGCT CACCACCACC GACCTGGCCA AGCACTTTAC CCCCGGTACC
CACGGCACCA CCTATGGTGG CAACCCGCTG GCCTGCGCAG TGGGCGAGGC GGTGCTGGAC
ATCGTCAATA CCCGCGAGAC CCTGGATGGC GTGAAGGTCA AGCACCAGCA GTTCAAGCAA
CGCCTGGAGG CGCTCGGCAA GCAGTTCGGT CTGTTCGAGC AGGTGCGCGG CATGGGCCTG
CTGCTCGGTT GCGTGCTCAA CGAGGCGTGG AAGGGCAAGG CCAAGCAGGT GCTGGACGCC
GCTTCCGCGG AAGGGCTGAT GATTCTGCAG GCCGGTCCGG ACGTGGTGCG TTTCGCCCCG
AGCCTGGTGG TGGAAGAGCG CGATATCGAA GAAGGCCTGG CCCGTTTCGA GCGTGCGCTG
AGCAAGCTGG CCAACGCCTG A
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| Protein sequence | MSVQHDAVQR ADFDQYMVPN YAPAAFVPVR GLGSRVWDQS GRELIDFAGG IAVNVLGHCH
PALVAALTEQ ANTLWHISNV FTNEPTLRLG KKLVDATFAE RVFFCNSGAE ANEAAFKLAR
RVAHDRFGPE KHEIIAALNS FHGRTLFTVS VGGQPKYSDG FGPKIQGITH VPYNDLEALK
AAISDKTCAV VLEPIQGEGG VLPAEKAYLE GARELCNAHN ALLVFDEVQS GMGRSGELFA
YMHYGVVPDI LSSAKSLGGG FPIAAMLTTT DLAKHFTPGT HGTTYGGNPL ACAVGEAVLD
IVNTRETLDG VKVKHQQFKQ RLEALGKQFG LFEQVRGMGL LLGCVLNEAW KGKAKQVLDA
ASAEGLMILQ AGPDVVRFAP SLVVEERDIE EGLARFERAL SKLANA
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