| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2894 |
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| Symbol | |
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| ID | 5107809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3204055 |
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| End bp | 3204351 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640504145 |
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| Product | sodium pump decarboxylase, gamma subunit |
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| Protein accession | YP_001188381 |
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| Protein GI | 146307916 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3630] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit |
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| TIGRFAM ID | [TIGR01195] sodium pump decarboxylases, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.11111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.988078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCAG CCCTGCGAGC TGCTGGCAAA GGAGCCAAGA TGACCCCCAG TGAACTCCTG
CTCGAGGGTG TCGAACTCAT GCTATTCGGC ATGGGTTTCG TGTTTACCTT TCTGGTGCTG
TTGGTGGCGG TGGTCAGCGC GATGTCGCGC CTGATCAATC TCTTCGCTCC GCACACCCCA
GCCCCCGCCA TCTCTGCCGC AGCACCCAGC ATCAAGCCGG CCAGCCATGA GCCGGATGCC
GAGGTACTGG CTGCCATCCA ATCCGCCATT CATCAGCACC GCGCCCGTCG CGGTTGA
|
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| Protein sequence | MNAALRAAGK GAKMTPSELL LEGVELMLFG MGFVFTFLVL LVAVVSAMSR LINLFAPHTP
APAISAAAPS IKPASHEPDA EVLAAIQSAI HQHRARRG
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