Gene Pmen_2862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2862 
Symbol 
ID5107777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3143507 
End bp3144493 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID640504112 
Producthypothetical protein 
Protein accessionYP_001188349 
Protein GI146307884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.276239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0557452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAT TGCCACTGCC TGACGGCCGC GTGCTGCAAG GCGAGTCGCG CGACTCTGCG 
ATCTGGCTGT CCTGCGACGG TCGGCCGCTG ATGCAGCTAC GCACGCTTGA CGCCAATACT
GTGCGGCTGC TGGAGGTGAC CACGGACGAT CTGGCCGATG CGCTGTGGTG CGCCAGCTAC
TGGTGGCTCG CCGCTCATCC GCAGGCGCCA CGTCTGGTCT GGGAGGGGTT GGATCAGCAC
GTGCTGCAGG CCTGTGGCGA CTGGCTGCGC AACGACGCCG GTAGCGCCAG TGCGCAGGTC
GAGCGCAGCC TGTTCTGGCA AGTGCCGCAG CCCTGGCTGC GCCAGGCACT GCCGCCTTAT
CCGCAGCGGA TGGTGATGAG CGACGGCAAA CGTCATCCGC GGCGCCGCGC CAAGCCCCAG
GGCGAGGTCT ACCGGCGTTT CGATGCGCGC CTGGGCGCCT GGATATCCCT GCGTACGCTG
GACATCGAAC AGGACCTGGA GCGCTTCAAT CGCTGGCAGA ACACGCCGCG CGTTCTGCAT
TTCTGGCAGG AGGGTGGCGA TCTGGCCCAG CACCGCAGCT ATCTCGAGAC CATCGCTGCC
GATCCGCATG TCTGCAGTCT GATCGGCTGC TTCGACGATC AGCCCTTCGC CTACTTCGAG
CTCTACTGGG CCAAGGAAGA CCGCATTGCG CCTTTCTATG TCGCGGACGA CTATGATCGC
GGCATCCACA TGCTGGTGGG TGAGCAGGCC CATCGCGGGC CGCACAAGGT GGCCAGCTGG
CTGGCGGCGC TGACCCATTA CGCCTTTCTC GACGATCCGC GCACCCGTCT GGTGGTAGCC
GAGCCGCGCG CCGACAACGC GAAGATGATC GGCTATATGC AAACGCTGGG TTACTACCGG
GAAAAGGAGT TCGACTTCCC TCACAAGCGC GCGGCGCTGA TGGCCATCGG TCGCGAGCGC
TTTTTTGATA GCGGGGTACT GTGTTGA
 
Protein sequence
MNALPLPDGR VLQGESRDSA IWLSCDGRPL MQLRTLDANT VRLLEVTTDD LADALWCASY 
WWLAAHPQAP RLVWEGLDQH VLQACGDWLR NDAGSASAQV ERSLFWQVPQ PWLRQALPPY
PQRMVMSDGK RHPRRRAKPQ GEVYRRFDAR LGAWISLRTL DIEQDLERFN RWQNTPRVLH
FWQEGGDLAQ HRSYLETIAA DPHVCSLIGC FDDQPFAYFE LYWAKEDRIA PFYVADDYDR
GIHMLVGEQA HRGPHKVASW LAALTHYAFL DDPRTRLVVA EPRADNAKMI GYMQTLGYYR
EKEFDFPHKR AALMAIGRER FFDSGVLC