| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2844 |
|---|
| Symbol | flgH |
|---|
| ID | 5107759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3127308 |
|---|
| End bp | 3128030 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640504094 |
|---|
| Product | flagellar basal body L-ring protein |
|---|
| Protein accession | YP_001188331 |
|---|
| Protein GI | 146307866 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG2063] Flagellar basal body L-ring protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0173222 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.127078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGGC AAGTTTTCTG TTTCCCCCTG TTGGCTGGCC TGCTGCTCAG CACTGGCTGC
GTGGCGCCGA CAGCCAAGCC GGACGACCCT TATTACGCGC CGGTGCTGCC GCGTACGCCG
CTGCCGGCTG CGCAGAACAA CGGCTCGATC TACCAGGCCG GCTTCGAGAA CGGTCTGTAC
GACGACCGCA AGGCGTTCCG TGTCGGTGAC ATCATCACCA TCACCCTCAA CGAGCGTACC
CAGGCCAGCA AGAACGCCAA CAGCAACATC CAGAAGGACA GTTCGGGTGC CATCGGCGCG
CCCAACCTGT TCGGCATGGC GGTAACGCCG GACAACCCGC TGCGTAGCCT CGGCGCGCTG
GGTATGAACA ACCCCAACCT GAGCCTTGAG GCCAACTGGA ACGCTCAGCG CGAAGCCAGC
GGTTCCGGTC AGGCGGGGCA GAGCAACAGC CTGTCCGGCT CGATCACCGT CACCGTCGCC
GAGGTATTGC CCAACGGCAT CCTCGCCGTG CGCGGCGAGA AGTGGATGAC CCTCAATACC
GGCGATGAGC TGGTGCGTAT TTCCGGGCTG GTGCGTGCCG ATGACATTTC CACCGACAAC
ACCGTGGCGT CCACCCGGGT GGCCGATGCG CGCATCACCT ATTCCGGCAC CGGTGCCTTC
GCCGATGCCA GCCAGCCGGG TTGGTTGAGC CGCTTCTTCC TCAGCCCCAT GTGGCCGTTC
TGA
|
|---|
| Protein sequence | MNRQVFCFPL LAGLLLSTGC VAPTAKPDDP YYAPVLPRTP LPAAQNNGSI YQAGFENGLY
DDRKAFRVGD IITITLNERT QASKNANSNI QKDSSGAIGA PNLFGMAVTP DNPLRSLGAL
GMNNPNLSLE ANWNAQREAS GSGQAGQSNS LSGSITVTVA EVLPNGILAV RGEKWMTLNT
GDELVRISGL VRADDISTDN TVASTRVADA RITYSGTGAF ADASQPGWLS RFFLSPMWPF
|
|---|
| |