Gene Pmen_2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2824 
SymbolfliG 
ID5107620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3100763 
End bp3101779 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content65% 
IMG OID640504074 
Productflagellar motor switch protein G 
Protein accessionYP_001188311 
Protein GI146307846 
COG category[N] Cell motility 
COG ID[COG1536] Flagellar motor switch protein 
TIGRFAM ID[TIGR00207] flagellar motor switch protein FliG 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.113129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0174319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA ATCGAACCGC TACCAAGCTG AACAAGGTCG ACAAGGCCGC CATTCTCCTG 
CTCTCGCTGG GCGAGACCGA CGCGGCTCAG GTGCTGCGTC ACCTCGGCCC GAAGGAAGTG
CAGCGCGTCG GTGTGGCCAT GGCCGGGATG CGCAACATTC ACCGCGAGCA GGTCGAACAG
GTGATGGCCG AGTTCGTCGA CATCGTCGGC GACCAGACCA GCCTCGGCGT GGGCGCCGAC
GGCTACATCC GCAAGATGCT CACCCAGGCC CTGGGCGAGG ACAAGGCCGG CAACCTGATC
GACCGCATCC TGCTGGGCGG CAGCACCAGC GGCCTGGACA GCCTGAAATG GATGGAGCCG
CGCGCCGTTG CCGATGTGAT TCGCTACGAG CACCCGCAGA TCCAGGCCAT CGTGGTCGCC
TATCTCGACC CGGACCAGGC CGGCGAGGTG CTCAGCCACT TCGACCACAA GGTGCGCCTG
GACATCATTC TGCGCGTGTC CTCGCTCAAC ACCGTGCAGC CGTCTGCCCT CAAGGAGCTC
AACCAGATTC TCGAGAAGCA GTTCTCCGGC AGCGCCAATA CCACGCGCGC CACCATGGGC
GGGGTCAAGC GTGCGGCGGA CATCATGAAC TTCCTCGACA GTTCGGTGGA AGGTCAGCTG
ATGGACTCGA TCCGCGAGGT GGACGAGGAC CTGTCGACGC AGATCGAGGA CCTGATGTTC
GTCTTCGACA ACCTGGCCGA CGTCGACGAC CGCGGCATCC AGGCACTGCT GCGCGAGGTG
TCCTCCGAAG TGCTGGTGCT GGCGCTCAAG GGCGCCGACG ACGCGATCAA GGACAAGGTG
TTCAAGAACA TGTCCAAGTG TGCCGCCGAG CTGCTGCGTG ACGACCTGGA AGCCAAGGGG
CCGGTCCGCG TCAGCGACGT CGAGGCGGCG CAGAAGGAAA TCCTCACCAT TGCCCGGCGC
ATGGCCGAGG CCGGCGAGAT CGTGCTCGGT GGCAAGGGCG GCGAGGAGAT GGTTTAG
 
Protein sequence
MSDNRTATKL NKVDKAAILL LSLGETDAAQ VLRHLGPKEV QRVGVAMAGM RNIHREQVEQ 
VMAEFVDIVG DQTSLGVGAD GYIRKMLTQA LGEDKAGNLI DRILLGGSTS GLDSLKWMEP
RAVADVIRYE HPQIQAIVVA YLDPDQAGEV LSHFDHKVRL DIILRVSSLN TVQPSALKEL
NQILEKQFSG SANTTRATMG GVKRAADIMN FLDSSVEGQL MDSIREVDED LSTQIEDLMF
VFDNLADVDD RGIQALLREV SSEVLVLALK GADDAIKDKV FKNMSKCAAE LLRDDLEAKG
PVRVSDVEAA QKEILTIARR MAEAGEIVLG GKGGEEMV