| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2820 |
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| Symbol | |
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| ID | 5107616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3097494 |
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| End bp | 3097799 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640504070 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001188307 |
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| Protein GI | 146307842 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0314331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCATCA CCTCGCAACC GTCGGCCGAC GGGCAAGAGC TGACCATCGT GATTCGAGGA
CGATTCGACT TCGCCTCCCA CCAGGAATTT CGTGACGCCT ACGAGCGCGT CAACATTACG
CCCAAGCGCT ATCAGGTCGA CCTGCAGGAC ACCAGCTATC TGGATAGCTC GGCCCTCGGC
ATGCTCCTGC TGCTGCGCGA TCACGCCGGC GGCGACGCGG CGCAGATCCG CCTGCTCAAC
TGCAGCAGCG ATGTGCGCAA GATCCTCGCC ATTTCCAACT TCGAGCAGTT GTTCCAGATC
AGCTGA
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| Protein sequence | MAITSQPSAD GQELTIVIRG RFDFASHQEF RDAYERVNIT PKRYQVDLQD TSYLDSSALG
MLLLLRDHAG GDAAQIRLLN CSSDVRKILA ISNFEQLFQI S
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